Literature DB >> 30150866

Easy strategy used to detect the genetic variability in chickpea (Cicer arietinum L.).

E Valadez-Moctezuma1, A J Cabrera-Hidalgo1.   

Abstract

A priority in the management and use of elite plant materials for breeding has been based on molecular markers or DNA sequencing of entire genomes, in order to perform genetic differentiation which is still quite costly. Chickpea (Cicer arietinum) is one of the species with genomic monotony and very low polymorphism, and its detection even with DNA markers has not been easy. In germplasm banks, the genetic distinction is a priority in order to use properly selected lines. In this study, 57 chickpea accessions from a germplasm bank were analyzed by using nrRAMP (non-radioactive Random Amplified Microsatellite Polymorphism) markers, and their genetic variability was determined. Our results showed DNA polymorphisms, which are enough to differentiate between the accessions and between C. arietinum and Cicer reticulatum (out-group); this last wild species is closely related to chickpea. We concluded that the nrRAMP technique was an effective and a highly useful method to assess the genetic diversity and variability among closely related plants, such as chickpea; in addition, this technique can be easily implemented in laboratories.

Entities:  

Keywords:  Chickpea; DNA markers; Genetic diversity; nrRAMP

Year:  2018        PMID: 30150866      PMCID: PMC6103936          DOI: 10.1007/s12298-018-0548-x

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  9 in total

1.  Molecular marker technologies for plant improvement.

Authors:  P Winter; G Kahl
Journal:  World J Microbiol Biotechnol       Date:  1995-07       Impact factor: 3.312

Review 2.  The molecular genetics of crop domestication.

Authors:  John F Doebley; Brandon S Gaut; Bruce D Smith
Journal:  Cell       Date:  2006-12-29       Impact factor: 41.582

3.  Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification.

Authors:  E Zietkiewicz; A Rafalski; D Labuda
Journal:  Genomics       Date:  1994-03-15       Impact factor: 5.736

4.  Detection of microsatellite polymorphisms without cloning.

Authors:  K S Wu; R Jones; L Danneberger; P A Scolnik
Journal:  Nucleic Acids Res       Date:  1994-08-11       Impact factor: 16.971

5.  Sequence-tagged microsatellite site markers for chickpea (Cicer arietinum L.).

Authors:  B Hüttel; P Winter; K Weising; W Choumane; F Weigand; G Kahl
Journal:  Genome       Date:  1999-04       Impact factor: 2.166

6.  Genetic diversity of chickpea (Cicer arietinum L.) germplasm in Pakistan as revealed by RAPD analysis.

Authors:  F Ahmad; A I Khan; F S Awan; B Sadia; H A Sadaqat; S Bahadur
Journal:  Genet Mol Res       Date:  2010

Review 7.  A bountiful harvest: genomic insights into crop domestication phenotypes.

Authors:  Kenneth M Olsen; Jonathan F Wendel
Journal:  Annu Rev Plant Biol       Date:  2013-02-28       Impact factor: 26.379

8.  Simple sequence repeat primers used in polymerase chain reaction amplifications to study genetic diversity in barley.

Authors:  M P Sánchez de la Hoz; J A Dávila; Y Loarce; E Ferrer
Journal:  Genome       Date:  1996-02       Impact factor: 2.166

9.  Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.).

Authors:  Hari D Upadhyaya; Sangam L Dwivedi; Michael Baum; Rajeev K Varshney; Sripada M Udupa; Cholenahalli L L Gowda; David Hoisington; Sube Singh
Journal:  BMC Plant Biol       Date:  2008-10-16       Impact factor: 4.215

  9 in total

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