Literature DB >> 30150396

Screening for genes that regulate the differentiation of human megakaryocytic lineage cells.

Fangfang Zhu1,2, Mingye Feng3, Rahul Sinha4,2, Jun Seita4,2, Yasuo Mori4,2, Irving L Weissman1,2,5,6.   

Abstract

Different combinations of transcription factors (TFs) function at each stage of hematopoiesis, leading to distinct expression patterns of lineage-specific genes. The identification of such regulators and their functions in hematopoiesis remain largely unresolved. In this study, we utilized screening approaches to study the transcriptional regulators of megakaryocyte progenitor (MkP) generation, a key step before platelet production. Promising candidate genes were generated from a microarray platform gene expression commons and individually manipulated in human hematopoietic stem and progenitor cells (HSPCs). Deletion of some of the candidate genes (the hit genes) by CRISPR/Cas9 led to decreased MkP generation during HSPC differentiation, while more MkPs were produced when some hit genes were overexpressed in HSPCs. We then demonstrated that overexpression of these genes can increase the frequency of mature megakaryocytic colonies by functional colony forming unit-megakaryocyte (CFU-Mk) assay and the release of platelets after in vitro maturation. Finally, we showed that the histone deacetylase inhibitors could also increase MkP differentiation, possibly by regulating some of the newly identified TFs. Therefore, identification of such regulators will advance the understanding of basic mechanisms of HSPC differentiation and conceivably enable the generation and maturation of megakaryocytes and platelets in vitro.

Entities:  

Keywords:  gene editing; megakaryocyte progenitor; screening; transcription factors

Mesh:

Year:  2018        PMID: 30150396      PMCID: PMC6176640          DOI: 10.1073/pnas.1805434115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  49 in total

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Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010 Nov-Dec

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Authors:  C Nerlov; T Graf
Journal:  Genes Dev       Date:  1998-08-01       Impact factor: 11.361

Review 3.  Transcription factor networks in erythroid cell and megakaryocyte development.

Authors:  Louis C Doré; John D Crispino
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4.  Genome-scale CRISPR-Cas9 knockout screening in human cells.

Authors:  Ophir Shalem; Neville E Sanjana; Ella Hartenian; Xi Shi; David A Scott; Tarjei Mikkelson; Dirk Heckl; Benjamin L Ebert; David E Root; John G Doench; Feng Zhang
Journal:  Science       Date:  2013-12-12       Impact factor: 47.728

5.  Comparative analysis of human ex vivo-generated platelets vs megakaryocyte-generated platelets in mice: a cautionary tale.

Authors:  Yuhuan Wang; Vincent Hayes; Danuta Jarocha; Xiuli Sim; Dawn C Harper; Rudy Fuentes; Spencer K Sullivan; Paul Gadue; Stella T Chou; Beverly J Torok-Storb; Michael S Marks; Deborah L French; Mortimer Poncz
Journal:  Blood       Date:  2015-04-07       Impact factor: 22.113

6.  A recurrent network involving the transcription factors PU.1 and Gfi1 orchestrates innate and adaptive immune cell fates.

Authors:  Chauncey J Spooner; Jason X Cheng; Elisabet Pujadas; Peter Laslo; Harinder Singh
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Journal:  J Pharmacol Pharmacother       Date:  2015 Jul-Sep

8.  Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche.

Authors:  James Y Chen; Masanori Miyanishi; Sean K Wang; Satoshi Yamazaki; Rahul Sinha; Kevin S Kao; Jun Seita; Debashis Sahoo; Hiromitsu Nakauchi; Irving L Weissman
Journal:  Nature       Date:  2016-02-11       Impact factor: 49.962

9.  Large-scale production of megakaryocytes from human pluripotent stem cells by chemically defined forward programming.

Authors:  Thomas Moreau; Amanda L Evans; Louella Vasquez; Marloes R Tijssen; Ying Yan; Matthew W Trotter; Daniel Howard; Maria Colzani; Meera Arumugam; Wing Han Wu; Amanda Dalby; Riina Lampela; Guenaelle Bouet; Catherine M Hobbs; Dean C Pask; Holly Payne; Tatyana Ponomaryov; Alexander Brill; Nicole Soranzo; Willem H Ouwehand; Roger A Pedersen; Cedric Ghevaert
Journal:  Nat Commun       Date:  2016-04-07       Impact factor: 14.919

10.  Repurposing CRISPR/Cas9 for in situ functional assays.

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Journal:  Genes Dev       Date:  2013-12-01       Impact factor: 11.361

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2.  Hunting for hematopoietic transcriptional networks.

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Review 3.  New Insights Into the Differentiation of Megakaryocytes From Hematopoietic Progenitors.

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8.  CRISPR-edited megakaryocytes for rapid screening of platelet gene functions.

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9.  Megakaryocyte progenitor cell function is enhanced upon aging despite the functional decline of aged hematopoietic stem cells.

Authors:  Donna M Poscablo; Atesh K Worthington; Stephanie Smith-Berdan; E Camilla Forsberg
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10.  N-Methyl-D-Aspartate Receptor Hypofunction in Meg-01 Cells Reveals a Role for Intracellular Calcium Homeostasis in Balancing Megakaryocytic-Erythroid Differentiation.

Authors:  James I Hearn; Taryn N Green; Martin Chopra; Yohanes N S Nursalim; Leandro Ladvanszky; Nicholas Knowlton; Cherie Blenkiron; Raewyn C Poulsen; Dean C Singleton; Stefan K Bohlander; Maggie L Kalev-Zylinska
Journal:  Thromb Haemost       Date:  2020-04-14       Impact factor: 5.249

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