Literature DB >> 30150364

A Functional riboSNitch in the 3' Untranslated Region of FKBP5 Alters MicroRNA-320a Binding Efficiency and Mediates Vulnerability to Chronic Post-Traumatic Pain.

Sarah D Linnstaedt1,2, Kyle D Riker3, Cathleen A Rueckeis3, Katrina M Kutchko4, Lela Lackey4, Kathleen R McCarthy3, Yi-Hsuan Tsai5, Joel S Parker5, Michael C Kurz6, Phyllis L Hendry7, Christopher Lewandowski8, Elizabeth Datner9, Claire Pearson10, Brian O'Neil11,12, Robert Domeier13, Sangeeta Kaushik14, Alain Laederach4, Samuel A McLean3,2,15.   

Abstract

Previous studies have shown that common variants of the gene coding for FK506-binding protein 51 (FKBP5), a critical regulator of glucocorticoid sensitivity, affect vulnerability to stress-related disorders. In a previous report, FKBP5 rs1360780 was identified as a functional variant because of its effect on gene methylation. Here we report evidence for a novel functional FKBP5 allele, rs3800373. This study assessed the association between rs3800373 and post-traumatic chronic pain in 1607 women and men from two ethnically diverse human cohorts. The molecular mechanism through which rs3800373 affects adverse outcomes was established via in silico, in vivo, and in vitro analyses. The rs3800373 minor allele predicted worse adverse outcomes after trauma exposure, such that individuals with the minor (risk) allele developed more severe post-traumatic chronic musculoskeletal pain. Among these individuals, peritraumatic circulating FKBP5 expression levels increased as cortisol and glucocorticoid receptor (NR3C1) mRNA levels increased, consistent with increased glucocorticoid resistance. Bioinformatic, in vitro, and mutational analyses indicate that the rs3800373 minor allele reduces the binding of a stress- and pain-associated microRNA, miR-320a, to FKBP5 via altering the FKBP5 mRNA 3'UTR secondary structure (i.e., is a riboSNitch). This results in relatively greater FKBP5 translation, unchecked by miR-320a. Overall, these results identify an important gene-miRNA interaction influencing chronic pain risk in vulnerable individuals and suggest that exogenous methods to achieve targeted reduction in poststress FKBP5 mRNA expression may constitute useful therapeutic strategies.SIGNIFICANCE STATEMENT FKBP5 is a critical regulator of the stress response. Previous studies have shown that dysregulation of the expression of this gene plays a role in the pathogenesis of chronic pain development as well as a number of comorbid neuropsychiatric disorders. In the current study, we identified a functional allele (rs3800373) in the 3'UTR of FKBP5 that influences vulnerability to chronic post-traumatic pain in two ethnic cohorts. Using multiple complementary experimental approaches, we show that the FKBP5 rs3800373 minor allele alters the secondary structure of FKBP5 mRNA, decreasing the binding of a stress- and pain-associated microRNA, miR-320a. This results in relatively greater FKBP5 translation, unchecked by miR-320a, increasing glucocorticoid resistance and increasing vulnerability to post-traumatic pain.
Copyright © 2018 the authors 0270-6474/18/388408-14$15.00/0.

Entities:  

Keywords:  FKBP5; RNA structure; chronic pain; functional genetics; microRNA; post-traumatic stress

Mesh:

Substances:

Year:  2018        PMID: 30150364      PMCID: PMC6158694          DOI: 10.1523/JNEUROSCI.3458-17.2018

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  96 in total

1.  Profile of circulating microRNAs in fibromyalgia and their relation to symptom severity: an exploratory study.

Authors:  Jan L Bjersing; Maria I Bokarewa; Kaisa Mannerkorpi
Journal:  Rheumatol Int       Date:  2014-09-28       Impact factor: 2.631

2.  Identifying causal variants at loci with multiple signals of association.

Authors:  Farhad Hormozdiari; Emrah Kostem; Eun Yong Kang; Bogdan Pasaniuc; Eleazar Eskin
Journal:  Genetics       Date:  2014-08-07       Impact factor: 4.562

3.  MicroRNA 320a Predicts Chronic Axial and Widespread Pain Development Following Motor Vehicle Collision in a Stress-Dependent Manner.

Authors:  Sarah D Linnstaedt; Kyle D Riker; Margaret G Walker; Jennifer E Nyland; Erin Zimny; Christopher Lewandowski; Phyllis L Hendry; Kathia Damiron; Claire Pearson; Marc-Anthony Velilla; Jeffrey Jones; Robert A Swor; Robert Domeier; Samuel A McLean
Journal:  J Orthop Sports Phys Ther       Date:  2016-10       Impact factor: 4.751

4.  A mammalian microRNA expression atlas based on small RNA library sequencing.

Authors:  Pablo Landgraf; Mirabela Rusu; Robert Sheridan; Alain Sewer; Nicola Iovino; Alexei Aravin; Sébastien Pfeffer; Amanda Rice; Alice O Kamphorst; Markus Landthaler; Carolina Lin; Nicholas D Socci; Leandro Hermida; Valerio Fulci; Sabina Chiaretti; Robin Foà; Julia Schliwka; Uta Fuchs; Astrid Novosel; Roman-Ulrich Müller; Bernhard Schermer; Ute Bissels; Jason Inman; Quang Phan; Minchen Chien; David B Weir; Ruchi Choksi; Gabriella De Vita; Daniela Frezzetti; Hans-Ingo Trompeter; Veit Hornung; Grace Teng; Gunther Hartmann; Miklos Palkovits; Roberto Di Lauro; Peter Wernet; Giuseppe Macino; Charles E Rogler; James W Nagle; Jingyue Ju; F Nina Papavasiliou; Thomas Benzing; Peter Lichter; Wayne Tam; Michael J Brownstein; Andreas Bosio; Arndt Borkhardt; James J Russo; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

5.  MicroRNA expression aberration as potential peripheral blood biomarkers for schizophrenia.

Authors:  Chi-Yu Lai; Sung-Liang Yu; Ming H Hsieh; Chun-Houh Chen; Hsuan-Yu Chen; Chun-Chiang Wen; Yung-Hsiang Huang; Po-Chang Hsiao; Chuhsing Kate Hsiao; Chih-Min Liu; Pan-Chyr Yang; Hai-Gwo Hwu; Wei J Chen
Journal:  PLoS One       Date:  2011-06-29       Impact factor: 3.240

6.  RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP).

Authors:  Nathan A Siegfried; Steven Busan; Greggory M Rice; Julie A E Nelson; Kevin M Weeks
Journal:  Nat Methods       Date:  2014-07-13       Impact factor: 28.547

7.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

Review 8.  Transcending the prediction paradigm: novel applications of SHAPE to RNA function and evolution.

Authors:  Katrina M Kutchko; Alain Laederach
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-07-10       Impact factor: 9.957

9.  CRHBP polymorphisms predict chronic pain development following motor vehicle collision.

Authors:  Sarah D Linnstaedt; Andrey V Bortsov; April C Soward; Robert Swor; David A Peak; Jeffrey Jones; Niels Rathlev; David C Lee; Robert Domeier; Phyllis L Hendry; Samuel A McLean
Journal:  Pain       Date:  2016-01       Impact factor: 7.926

10.  MicroRNA circulating in the early aftermath of motor vehicle collision predict persistent pain development and suggest a role for microRNA in sex-specific pain differences.

Authors:  Sarah D Linnstaedt; Margaret G Walker; Joel S Parker; Eunice Yeh; Robert L Sons; Erin Zimny; Christopher Lewandowski; Phyllis L Hendry; Kathia Damiron; Claire Pearson; Marc-Anthony Velilla; Brian J O'Neil; Jeffrey Jones; Robert Swor; Robert Domeier; Scott Hammond; Samuel A McLean
Journal:  Mol Pain       Date:  2015-10-24       Impact factor: 3.395

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  15 in total

1.  Identification and analysis of RNA structural disruptions induced by single nucleotide variants using Riprap and RiboSNitchDB.

Authors:  Jianan Lin; Yang Chen; Yuping Zhang; Zhengqing Ouyang
Journal:  NAR Genom Bioinform       Date:  2020-08-14

Review 2.  Computational approaches for the discovery of splicing regulatory RNA structures.

Authors:  Ryan J Andrews; Walter N Moss
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-04-29       Impact factor: 4.490

3.  Duration of Reduction in Enduring Stress-Induced Hyperalgesia Via FKBP51 Inhibition Depends on Timing of Administration Relative to Traumatic Stress Exposure.

Authors:  Britannia J Wanstrath; Samuel A McLean; Ying Zhao; Jacqueline Mickelson; Michael Bauder; Felix Hausch; Sarah D Linnstaedt
Journal:  J Pain       Date:  2022-03-14       Impact factor: 5.383

Review 4.  Disease-associated human genetic variation through the lens of precursor and mature RNA structure.

Authors:  Justin M Waldern; Jayashree Kumar; Alain Laederach
Journal:  Hum Genet       Date:  2021-11-06       Impact factor: 5.881

5.  Whiplash-Associated Dysphagia: Considerations of Potential Incidence and Mechanisms.

Authors:  D Stone; H Bogaardt; S D Linnstaedt; B Martin-Harris; A C Smith; D M Walton; E Ward; J M Elliott
Journal:  Dysphagia       Date:  2019-08-03       Impact factor: 3.438

6.  Prior sleep problems and adverse post-traumatic neuropsychiatric sequelae of motor vehicle collision in the AURORA study.

Authors:  Thomas C Neylan; Ronald C Kessler; Kerry J Ressler; Gari Clifford; Francesca L Beaudoin; Xinming An; Jennifer S Stevens; Donglin Zeng; Sarah D Linnstaedt; Laura T Germine; Sophia Sheikh; Alan B Storrow; Brittany E Punches; Kamran Mohiuddin; Nina T Gentile; Meghan E McGrath; Sanne J H van Rooij; John P Haran; David A Peak; Robert M Domeier; Claire Pearson; Leon D Sanchez; Niels K Rathlev; William F Peacock; Steven E Bruce; Jutta Joormann; Deanna M Barch; Diego A Pizzagalli; John F Sheridan; Steven E Harte; James M Elliott; Irving Hwang; Maria V Petukhova; Nancy A Sampson; Karestan C Koenen; Samuel A McLean
Journal:  Sleep       Date:  2021-03-12       Impact factor: 5.849

7.  FK506-binding protein 5 promotes the progression of papillary thyroid carcinoma.

Authors:  Zhenya Gao; Fang Yu; Huanxia Jia; Zhuo Ye; Shijie Yao
Journal:  J Int Med Res       Date:  2021-04       Impact factor: 1.671

8.  Macrocyclic FKBP51 Ligands Define a Transient Binding Mode with Enhanced Selectivity.

Authors:  Andreas M Voll; Christian Meyners; Martha C Taubert; Thomas Bajaj; Tim Heymann; Stephanie Merz; Anna Charalampidou; Jürgen Kolos; Patrick L Purder; Thomas M Geiger; Pablo Wessig; Nils C Gassen; Andreas Bracher; Felix Hausch
Journal:  Angew Chem Int Ed Engl       Date:  2021-05-07       Impact factor: 15.336

9.  Evaluation of the Association Between Genetic Variants in Circadian Rhythm Genes and Posttraumatic Stress Symptoms Identifies a Potential Functional Allele in the Transcription Factor TEF.

Authors:  Sarah D Linnstaedt; Yue Pan; Matthew C Mauck; Jenyth Sullivan; Christine Y Zhou; Lindsey Jung; Cathleen A Rueckeis; Jameson D Blount; Matthew S Carson; Andrew S Tungate; Michael C Kurz; Phyllis L Hendry; Christopher Lewandowski; Teresa D'Anza; Elizabeth Datner; Kathy Bell; Megan Lechner; Jeffrey W Shupp; Bruce A Cairns; Samuel A McLean
Journal:  Front Psychiatry       Date:  2018-11-15       Impact factor: 4.157

10.  Integrative Analysis of Somatic Mutations in Non-coding Regions Altering RNA Secondary Structures in Cancer Genomes.

Authors:  Funan He; Ran Wei; Zhan Zhou; Leihuan Huang; Yinan Wang; Jie Tang; Yangyun Zou; Leming Shi; Xun Gu; Melissa J Davis; Zhixi Su
Journal:  Sci Rep       Date:  2019-06-03       Impact factor: 4.379

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