Literature DB >> 30150092

Bifidobacterium primatium sp. nov., Bifidobacterium scaligerum sp. nov., Bifidobacterium felsineum sp. nov. and Bifidobacterium simiarum sp. nov.: Four novel taxa isolated from the faeces of the cotton top tamarin (Saguinus oedipus) and the emperor tamarin (Saguinus imperator).

Monica Modesto1, Edoardo Puglisi2, Andrea Bonetti1, Samanta Michelini3, Caterina Spiezio4, Camillo Sandri4, Barbara Sgorbati5, Lorenzo Morelli2, Paola Mattarelli6.   

Abstract

Four novel Gram-stain-positive, non spore forming and fructose-6-phosphate phosphoketolase-positive strains were isolated from the faeces of a cotton top tamarin (Saguinus oedipus) and an emperor tamarin (Saguinus imperator). Phylogenetic analyses based on 16S rRNA revealed that bifidobacterial strains TRE 1T exhibit close phylogenetic relatedness to Bifidobacterium catulorum DSM 103154 (96.0%) and Bifidobacterium tissieri DSM 100201 (96.0%); TRE DT and TRE HT were closely related to Bifidobacterium longum subsp. longum ATCC 15708T with similarity values of 97.4% and 97.5%, respectively; TRI 7T was closely related to Bifidobacterium tissieri DSM 100201 (96.0%). The Average Nucleotide Identity (ANI) and in silico DDH (isDDH) analysis with closest neighbour supported an independent phylogenetic position of all strains with values ranged from 74 to 85% for ANI and from 24 to 28% for isDDH. DNA base composition of the four strains was in the range of 58.3-63.5mol% G+C. Based on the phylogenetic, genotypic and phenotypic data, the strains TRE 1T, TRE DT, TRE HT and TRI 7T clearly represent four novel taxa within the genus Bifidobacterium for which the names Bifidobacterium primatium sp. nov. (type strain TRE 1T=DSM 100687T=JCM 30945T), Bifidobacterium scaligerum sp. nov. (type strain TRE DT=DSM 103140T=JCM 31792T), Bifidobacterium felsineum sp. nov. (type strain TRE HT=DSM 103139T=JCM 31789T) and Bifidobacterium simiarum sp. nov. (type strain TRI 7T=DSM 103153T=JCM 31793) are proposed.
Copyright © 2018 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Bifidobacterium; Bifidobacterium primatium sp. nov.; Bifidobacterium scaligerum sp. nov. Bifidobacterium felsineum sp. nov. and Bifidobacterium simiarum sp. nov.; Cotton-top tamarin; Emperor tamarin; New species; Saguinus imperator; Saguinus oedipus

Mesh:

Substances:

Year:  2018        PMID: 30150092     DOI: 10.1016/j.syapm.2018.07.005

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  5 in total

1.  Unveiling Genomic Diversity among Members of the Species Bifidobacterium pseudolongum, a Widely Distributed Gut Commensal of the Animal Kingdom.

Authors:  Gabriele Andrea Lugli; Sabrina Duranti; Korin Albert; Leonardo Mancabelli; Stefania Napoli; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Christian Milani; Francesca Turroni; Giulia Alessandri; David A Sela; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

2.  Isolation of novel gut bifidobacteria using a combination of metagenomic and cultivation approaches.

Authors:  Gabriele Andrea Lugli; Christian Milani; Sabrina Duranti; Giulia Alessandri; Francesca Turroni; Leonardo Mancabelli; Danilo Tatoni; Maria Cristina Ossiprandi; Douwe van Sinderen; Marco Ventura
Journal:  Genome Biol       Date:  2019-05-16       Impact factor: 13.583

3.  Breast milk urea as a nitrogen source for urease positive Bifidobacterium infantis.

Authors:  Patrick Schimmel; Lennart Kleinjans; Roger S Bongers; Jan Knol; Clara Belzer
Journal:  FEMS Microbiol Ecol       Date:  2021-03-08       Impact factor: 4.194

Review 4.  Varied Pathways of Infant Gut-Associated Bifidobacterium to Assimilate Human Milk Oligosaccharides: Prevalence of the Gene Set and Its Correlation with Bifidobacteria-Rich Microbiota Formation.

Authors:  Mikiyasu Sakanaka; Aina Gotoh; Keisuke Yoshida; Toshitaka Odamaki; Hiroka Koguchi; Jin-Zhong Xiao; Motomitsu Kitaoka; Takane Katayama
Journal:  Nutrients       Date:  2019-12-26       Impact factor: 5.717

5.  Captive Common Marmosets (Callithrix jacchus) Are Colonized throughout Their Lives by a Community of Bifidobacterium Species with Species-Specific Genomic Content That Can Support Adaptation to Distinct Metabolic Niches.

Authors:  Lifeng Zhu; Qinnan Yang; Mallory J Suhr Van Haute; Car Reen Kok; Joao Carlos Gomes-Neto; Natasha Pavlovikj; Resmi Pillai; Rohita Sinha; Haley Hassenstab; Aaryn Mustoe; Etsuko N Moriyama; Robert Hutkins; Jeffrey French; Andrew K Benson
Journal:  mBio       Date:  2021-08-03       Impact factor: 7.867

  5 in total

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