Literature DB >> 3014504

Inquiries into the structure-function relationship of ribonuclease T1 using chemically synthesized coding sequences.

M Ikehara, E Ohtsuka, T Tokunaga, S Nishikawa, S Uesugi, T Tanaka, Y Aoyama, S Kikyodani, K Fujimoto, K Yanase.   

Abstract

The genes for ribonuclease T1 and its site-specific mutants were chemically synthesized and introduced to Escherichia coli. All enzymes were fusion products produced by joining the synthetic gene at specific restriction sites to the synthetic gene for human growth hormone in a plasmid containing the E. coli trp promoter. The fusion protein from this plasmid contained 66% of the amino-terminal sequences of the human growth hormone, which were recognizable immunologically. RNase T1 or its mutants were cleaved from the fusion protein with cyanogen bromide. The synthetic RNase T1 endowed with the revised wild-type triad Gly-Ser-Pro, residues 71-73, was fully functional, readily hydrolyzing pGpC bonds, whereas a mutant enzyme having the originally reported, erroneous triad Pro-Gly-Ser was totally inactive. Various amino acid substitutions were also introduced to the guanosine recognition region comprised of residues 42-45, Tyr-Asn-Asn-Tyr. Substitution of either of the tyrosine residues noted above with phenylalanine had no dramatic effect on the enzyme's function. Replacement of asparagine-43 with arginine or alanine also caused only a small change in the hydrolyzing activity--a mutant enzyme maintained greater than 50% of the wild-type activity. In sharp contrast, when aspartic acid or alanine was substituted for asparagine-44, the activity was dramatically reduced to a few percent of the wild-type activity.

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Year:  1986        PMID: 3014504      PMCID: PMC323808          DOI: 10.1073/pnas.83.13.4695

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  STRUCTURE OF A RIBONUCLEIC ACID.

Authors:  R W HOLLEY; J APGAR; G A EVERETT; J T MADISON; M MARQUISEE; S H MERRILL; J R PENSWICK; A ZAMIR
Journal:  Science       Date:  1965-03-19       Impact factor: 47.728

2.  Nonenzymatic cleavage of peptide bonds: the methionine residues in bovine pancreatic ribonuclease.

Authors:  E GROSS; B WITKOP
Journal:  J Biol Chem       Date:  1962-06       Impact factor: 5.157

3.  Three-dimensional structure of the ribonuclease T1 X 3'-guanylic acid complex at 2.6 A resolution.

Authors:  S Sugio; K Oka; H Ohishi; K Tomita; W Saenger
Journal:  FEBS Lett       Date:  1985-04-08       Impact factor: 4.124

4.  Phosphorylation of nucleic acid by an enzyme from T4 bacteriophage-infected Escherichia coli.

Authors:  C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1965-07       Impact factor: 11.205

5.  The amino acid sequence of ribonuclease T-1.

Authors:  K Takahashi
Journal:  J Biol Chem       Date:  1965-10       Impact factor: 5.157

6.  A revision and confirmation of the amino acid sequence of ribonuclease T1.

Authors:  K Takahashi
Journal:  J Biochem       Date:  1985-09       Impact factor: 3.387

7.  Synthesis and expression of the native RNase T1 gene and several mutant genes.

Authors:  S Nishikawa; H Morioka; T Tokunaga; Y Aoyama; S Kikyotani; K Fujimoto; K Yanase; T Tanaka; S Uesugi; E Ohtsuka
Journal:  Nucleic Acids Symp Ser       Date:  1985

8.  DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping.

Authors:  E Jay; R Bambara; R Padmanabhan; R Wu
Journal:  Nucleic Acids Res       Date:  1974-03       Impact factor: 16.971

9.  The identification of a glutamic acid residue as part of the active site of ribonuclease T-1.

Authors:  K Takahashi; W H Stein; S Moore
Journal:  J Biol Chem       Date:  1967-10-25       Impact factor: 5.157

10.  Synthesis of a gene for human growth hormone and its expression in Escherichia coli.

Authors:  M Ikehara; E Ohtsuka; T Tokunaga; Y Taniyama; S Iwai; K Kitano; S Miyamoto; T Ohgi; Y Sakuragawa; K Fujiyama
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

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  5 in total

1.  Highly efficient endonucleolytic cleavage of RNA by a Cys(2)His(2) zinc-finger peptide.

Authors:  W F Lima; S T Crooke
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

2.  Phospho-RNA sequencing with circAID-p-seq.

Authors:  Alessia Del Piano; Tea Kecman; Michael Schmid; Ruggero Barbieri; Luciano Brocchieri; Silvia Tornaletti; Claudia Firrito; Luca Minati; Paola Bernabo; Ilaria Signoria; Fabio Lauria; Thomas H Gillingwater; Gabriella Viero; Massimiliano Clamer
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

3.  Fabrication of RNA 3D Nanoprisms for Loading and Protection of Small RNAs and Model Drugs.

Authors:  Emil F Khisamutdinov; Daniel L Jasinski; Hui Li; Kaiming Zhang; Wah Chiu; Peixuan Guo
Journal:  Adv Mater       Date:  2016-10-19       Impact factor: 30.849

Review 4.  Strategies for achieving high-level expression of genes in Escherichia coli.

Authors:  S C Makrides
Journal:  Microbiol Rev       Date:  1996-09

5.  Binding and cleavage specificities of human Argonaute2.

Authors:  Walt F Lima; Hongjiang Wu; Josh G Nichols; Hong Sun; Heather M Murray; Stanley T Crooke
Journal:  J Biol Chem       Date:  2009-07-22       Impact factor: 5.157

  5 in total

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