Literature DB >> 30137371

3D deep learning for detecting pulmonary nodules in CT scans.

Ross Gruetzemacher1, Ashish Gupta1, David Paradice1.   

Abstract

Objective: To demonstrate and test the validity of a novel deep-learning-based system for the automated detection of pulmonary nodules. Materials and
Methods: The proposed system uses 2 3D deep learning models, 1 for each of the essential tasks of computer-aided nodule detection: candidate generation and false positive reduction. A total of 888 scans from the LIDC-IDRI dataset were used for training and evaluation.
Results: Results for candidate generation on the test data indicated a detection rate of 94.77% with 30.39 false positives per scan, while the test results for false positive reduction exhibited a sensitivity of 94.21% with 1.789 false positives per scan. The overall system detection rate on the test data was 89.29% with 1.789 false positives per scan. Discussion: An extensive and rigorous validation was conducted to assess the performance of the proposed system. The system demonstrated a novel combination of 3D deep neural network architectures and demonstrates the use of deep learning for both candidate generation and false positive reduction to be evaluated with a substantial test dataset. The results strongly support the ability of deep learning pulmonary nodule detection systems to generalize to unseen data. The source code and trained model weights have been made available.
Conclusion: A novel deep-neural-network-based pulmonary nodule detection system is demonstrated and validated. The results provide comparison of the proposed deep-learning-based system over other similar systems based on performance.

Entities:  

Year:  2018        PMID: 30137371      PMCID: PMC6188511          DOI: 10.1093/jamia/ocy098

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  43 in total

1.  Computerized detection of pulmonary nodules on CT scans.

Authors:  S G Armato; M L Giger; C J Moran; J T Blackburn; K Doi; H MacMahon
Journal:  Radiographics       Date:  1999 Sep-Oct       Impact factor: 5.333

2.  Multi-scale Convolutional Neural Networks for Lung Nodule Classification.

Authors:  Wei Shen; Mu Zhou; Feng Yang; Caiyun Yang; Jie Tian
Journal:  Inf Process Med Imaging       Date:  2015

3.  Computer-aided diagnostic scheme for distinction between benign and malignant nodules in thoracic low-dose CT by use of massive training artificial neural network.

Authors:  Kenji Suzuki; Feng Li; Shusuke Sone; Kunio Doi
Journal:  IEEE Trans Med Imaging       Date:  2005-09       Impact factor: 10.048

4.  Selective enhancement filters for nodules, vessels, and airway walls in two- and three-dimensional CT scans.

Authors:  Qiang Li; Shusuke Sone; Kunio Doi
Journal:  Med Phys       Date:  2003-08       Impact factor: 4.071

5.  Phased searching with NEAT in a time-scaled framework: experiments on a computer-aided detection system for lung nodules.

Authors:  Maxine Tan; Rudi Deklerck; Jan Cornelis; Bart Jansen
Journal:  Artif Intell Med       Date:  2013-08-12       Impact factor: 5.326

6.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

7.  3D Convolutional Neural Network for Automatic Detection of Lung Nodules in Chest CT.

Authors:  Sardar Hamidian; Berkman Sahiner; Nicholas Petrick; Aria Pezeshk
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-03

8.  The Cancer Imaging Archive (TCIA): maintaining and operating a public information repository.

Authors:  Kenneth Clark; Bruce Vendt; Kirk Smith; John Freymann; Justin Kirby; Paul Koppel; Stephen Moore; Stanley Phillips; David Maffitt; Michael Pringle; Lawrence Tarbox; Fred Prior
Journal:  J Digit Imaging       Date:  2013-12       Impact factor: 4.056

9.  Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

Authors:  Jacques Ferlay; Isabelle Soerjomataram; Rajesh Dikshit; Sultan Eser; Colin Mathers; Marise Rebelo; Donald Maxwell Parkin; David Forman; Freddie Bray
Journal:  Int J Cancer       Date:  2014-10-09       Impact factor: 7.396

10.  Central focused convolutional neural networks: Developing a data-driven model for lung nodule segmentation.

Authors:  Shuo Wang; Mu Zhou; Zaiyi Liu; Zhenyu Liu; Dongsheng Gu; Yali Zang; Di Dong; Olivier Gevaert; Jie Tian
Journal:  Med Image Anal       Date:  2017-06-30       Impact factor: 8.545

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  12 in total

1.  Machine learning mortality classification in clinical documentation with increased accuracy in visual-based analyses.

Authors:  Susan M Slattery; Daniel C Knight; Debra E Weese-Mayer; William A Grobman; Doug C Downey; Karna Murthy
Journal:  Acta Paediatr       Date:  2019-12-10       Impact factor: 2.299

2.  Boundary Restored Network for Subpleural Pulmonary Lesion Segmentation on Ultrasound Images at Local and Global Scales.

Authors:  Yupeng Xu; Yi Zhang; Ke Bi; Zhiyu Ning; Lisha Xu; Mengjun Shen; Guoying Deng; Yin Wang
Journal:  J Digit Imaging       Date:  2020-10       Impact factor: 4.056

3.  A Pulmonary Nodule Spiculation Recognition Algorithm Based on Generative Adversarial Networks.

Authors:  Jing Zhang; Shi Qiu; Xiaohai Cui; Ting Liang
Journal:  Biomed Res Int       Date:  2022-06-24       Impact factor: 3.246

4.  Ensemble Learning Framework with GLCM Texture Extraction for Early Detection of Lung Cancer on CT Images.

Authors:  Sara A Althubiti; Sanchita Paul; Rajanikanta Mohanty; Sachi Nandan Mohanty; Fayadh Alenezi; Kemal Polat
Journal:  Comput Math Methods Med       Date:  2022-06-02       Impact factor: 2.809

Review 5.  Artificial Intelligence in Health in 2018: New Opportunities, Challenges, and Practical Implications.

Authors:  Gretchen Jackson; Jianying Hu
Journal:  Yearb Med Inform       Date:  2019-08-16

Review 6.  3D Deep Learning on Medical Images: A Review.

Authors:  Satya P Singh; Lipo Wang; Sukrit Gupta; Haveesh Goli; Parasuraman Padmanabhan; Balázs Gulyás
Journal:  Sensors (Basel)       Date:  2020-09-07       Impact factor: 3.576

7.  Deep convolutional neural networks for multiplanar lung nodule detection: Improvement in small nodule identification.

Authors:  Sunyi Zheng; Ludo J Cornelissen; Xiaonan Cui; Xueping Jing; Raymond N J Veldhuis; Matthijs Oudkerk; Peter M A van Ooijen
Journal:  Med Phys       Date:  2020-12-30       Impact factor: 4.071

8.  Improved computer-aided detection of pulmonary nodules via deep learning in the sinogram domain.

Authors:  Yongfeng Gao; Jiaxing Tan; Zhengrong Liang; Lihong Li; Yumei Huo
Journal:  Vis Comput Ind Biomed Art       Date:  2019-11-22

9.  Development and clinical application of deep learning model for lung nodules screening on CT images.

Authors:  Sijia Cui; Shuai Ming; Yi Lin; Fanghong Chen; Qiang Shen; Hui Li; Gen Chen; Xiangyang Gong; Haochu Wang
Journal:  Sci Rep       Date:  2020-08-12       Impact factor: 4.379

10.  Reporting radiographers and their role in thoracic CT service improvement: managing the pulmonary nodule.

Authors:  Paul Holland; Hazel Spence; Alison Clubley; Chantel Brooks; David Baldwin; Kate Pointon
Journal:  BJR Open       Date:  2020-03-10
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