Literature DB >> 30135027

Strategies for the Enrichment and Selection of Genetically Modified Cells.

Chonghua Ren1, Kun Xu2, David Jay Segal3, Zhiying Zhang4.   

Abstract

Programmable artificial nucleases have transitioned over the past decade from ZFNs and TALENs to CRISPR/Cas systems, which have been ubiquitously used with great success to modify genomes. The efficiencies of knockout and knockin vary widely among distinct cell types and genomic loci and depend on the nuclease delivery and cleavage efficiencies. Moreover, genetically modified cells are almost phenotypically indistinguishable from normal counterparts, making screening and isolating positive cells rather challenging and time-consuming. To address this issue, we review several strategies for the enrichment and selection of genetically modified cells, including transfection-positive selection, nuclease-positive selection, genome-targeted positive selection, and knockin-positive selection, to provide a reference for future genome research and gene therapy studies.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Keywords:  Artificial nucleases; enrichment; genetically modified cells; genome editing; selection

Mesh:

Year:  2018        PMID: 30135027     DOI: 10.1016/j.tibtech.2018.07.017

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  11 in total

1.  CRISPR/Cas9-facilitated engineering with growth-coupled and sensor-guided in vivo screening of enzyme variants for a more efficient chorismate pathway in E. coli.

Authors:  Minliang Chen; Lin Chen; An-Ping Zeng
Journal:  Metab Eng Commun       Date:  2019-05-06

2.  Universal toxin-based selection for precise genome engineering in human cells.

Authors:  Nina Akrap; Silvia Cerboni; Songyuan Li; Michelle J Porritt; Sandra Wimberger; Anders Lundin; Carl Möller; Mike Firth; Euan Gordon; Bojana Lazovic; Aleksandra Sieńska; Luna Simona Pane; Matthew A Coelho; Giovanni Ciotta; Giovanni Pellegrini; Marcella Sini; Xiufeng Xu; Suman Mitra; Mohammad Bohlooly-Y; Benjamin J M Taylor; Grzegorz Sienski; Marcello Maresca
Journal:  Nat Commun       Date:  2021-01-21       Impact factor: 14.919

3.  Magnetic-Activated Cell Sorting Using Coiled-Coil Peptides: An Alternative Strategy for Isolating Cells with High Efficiency and Specificity.

Authors:  Meng-Jie Shen; René C L Olsthoorn; Ye Zeng; Thomas Bakkum; Alexander Kros; Aimee L Boyle
Journal:  ACS Appl Mater Interfaces       Date:  2021-03-03       Impact factor: 9.229

4.  Fast but not furious: a streamlined selection method for genome-edited cells.

Authors:  Haribaskar Ramachandran; Soraia Martins; Zacharias Kontarakis; Jean Krutmann; Andrea Rossi
Journal:  Life Sci Alliance       Date:  2021-04-26

Review 5.  Strategies for High-Efficiency Mutation Using the CRISPR/Cas System.

Authors:  Shuying Feng; Zilong Wang; Aifang Li; Xin Xie; Junjie Liu; Shuxuan Li; Yalan Li; Baiyan Wang; Lina Hu; Lianhe Yang; Tao Guo
Journal:  Front Cell Dev Biol       Date:  2022-02-07

6.  Imaging Unique DNA Sequences in Individual Cells Using a CRISPR-Cas9-Based, Split Luciferase Biosensor.

Authors:  Nicholas G Heath; Henriette O'Geen; Nicole B Halmai; Jacob E Corn; David J Segal
Journal:  Front Genome Ed       Date:  2022-03-25

7.  GPI-anchored glutathione S-transferase as marker allows affinity sorting of transfection-positive cells.

Authors:  Shumin Ma; Lele Yang; Qingqing Zuo; Qilai Huang
Journal:  Front Mol Biosci       Date:  2022-09-29

8.  sgRNA-shRNA Structure Mediated SNP Site Editing on Porcine IGF2 Gene by CRISPR/StCas9.

Authors:  Yongsen Sun; Nana Yan; Lu Mu; Bing Sun; Jingrong Deng; Yuanyuan Fang; Simin Shao; Qiang Yan; Furong Han; Zhiying Zhang; Kun Xu
Journal:  Front Genet       Date:  2019-04-18       Impact factor: 4.599

9.  A Universal Surrogate Reporter for Efficient Enrichment of CRISPR/Cas9-Mediated Homology-Directed Repair in Mammalian Cells.

Authors:  Nana Yan; Yongsen Sun; Yuanyuan Fang; Jingrong Deng; Lu Mu; Kun Xu; Joe S Mymryk; Zhiying Zhang
Journal:  Mol Ther Nucleic Acids       Date:  2019-12-24       Impact factor: 8.886

Review 10.  Genetic glycoengineering in mammalian cells.

Authors:  Yoshiki Narimatsu; Christian Büll; Yen-Hsi Chen; Hans H Wandall; Zhang Yang; Henrik Clausen
Journal:  J Biol Chem       Date:  2021-02-20       Impact factor: 5.157

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