| Literature DB >> 30134857 |
Fahimeh Kordestani1, Sahar Mazloomi1, Yousef Mortazavi2,3, Saeideh Mazloomzadeh4, Mojtaba Fathi5,6, Haleh Rahmanpour7, Abolfazl Nazarian8.
Abstract
BACKGROUND: Polycystic ovary syndrome (PCOS) is the main cause of female infertility. Interactions among genetic, biochemical, and immunological factors can affect the pathogenesis of PCOS. As a proinflammatory cytokine, tumor necrosis factor-α (TNF-α) plays an important role in this regard. The present study aimed to evaluate the association of the rs361525 gene single-nucleotide polymorphism (SNP) and TNF-α serum levels with the hormonal and biochemical characteristics of PCOS in Iranian individuals.Entities:
Keywords: Hormone profile; Polycystic ovary syndrome (PCOS); Polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP); Polymorphism; Tumor necrosis factor-alpha (TNF-α)
Mesh:
Substances:
Year: 2018 PMID: 30134857 PMCID: PMC6106732 DOI: 10.1186/s12881-018-0662-1
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Fig. 1a Gene map of a single-nucleotide polymorphism (SNP) in TNF-α gene on chromosome 6. Semi-nested PCR with two pairs of primers. The reverse primer was common for both PCRs. b Primers and PCR product size in the first PCR. c Primers and PCR product size in the second PCR (semi-nested). (TNF-α: tumor necrosis factor-α)
Participants’ Demographic, Anthropometric, Biochemical, and Hormonal Characteristics
| Characteristic | PCOS patients ( | Control ( | |
|---|---|---|---|
| Age (yr) | 26.49 ± 6.34 | 27.46 ± 7.06 | 0.353 |
| Height (cm) | 160.59 ± 5.75 | 161.31 ± 5.09 | 0.36 |
| Body weight (kg) | 66.74 ± 14.25 | 62.60 ± 11.70 | 0.024* |
| BMI (kg/m2) | 25.88 ± 5.24 | 24.07 ± 4.5 | 0.008* |
| WC (cm) | 86.57 ± 12.78 | 82.14 ± 10.66 | 0.009* |
| HC (cm) | 102.49 ± 12.53 | 100.99 ± 10.56 | 0.37 |
| WHR | 0.84 ± 0.1 | 0.81 ± 0.07 | 0.007* |
| SBP (mmHg) | 105.90 ± 10.62 | 106.01 ± 17.38 | 0.55 |
| TC (mg/dl) | 187.89 ± 37.03 | 178.83 ± 32.79 | 0.05* |
| TG (mg/dl) | 122.45 ± 24.177 | 105.25 ± 27.33 | < 0.0001* |
| HDL.c (mg/dl) | 41.79 ± 11.61 | 40.3 ± 9.96 | 0.377 |
| LDL.c (mg/dl) | 119.88 ± 26.86 | 113.67 ± 23.76 | 0.069 |
| Insulin (μg/dl) | 15.64 ± 5.9 | 8.99 ± 4.36 | < 0.0001* |
| FBS (mg/dl) | 68.83 ± 12.35 | 71.9 ± 14.41 | 0.089 |
| HOMA-IR | 2.59 ± 1.4 | 1.18 ± 0.99 | < 0.0001* |
| E2 (pg/ml) | 57.08 ± 38.96 | 73.44 ± 53.68 | 0.021* |
| Testosterone (pg/ml) | 1.01 ± 0.45 | 0.89 ± 0.66 | < 0.0001* |
| TNF-α (pg/ml) | 2.96 ± 1.37 | 2.37 ± 0.94 | < 0.0001* |
| FSH (IU/L) | 7.42 ± 3.78 | 8.97 ± 6.62 | 0.005* |
| LH (IU/L) | 10.25 ± 10.51 | 6.38 ± 4.44 | < 0.0001* |
| LH/FSH | 1.47 ± 1.22 | 0.86 ± 0.71 | < 0.0001* |
Data expressed as mean ± standard deviation (SD). Abbreviations: BMI, body mass index; WC, waist circumference; HC, hip circumference; WHR, waist hip ratio; SBP, systolic blood pressure; TC, total cholesterol; TG, triglyceride; HDL, high density lipoprotein; LDL, low density lipoprotein; FBS, fast blood sugar; HOMA-IR, homeostatic model assessment for insulin resistance; E2, estradiol; TNF-α, tumor necrosis factor-α; FSH, follicle-stimulating hormone; LH, luteinizing hormone, *indicates that this entity is significant statistically
Fig. 2Nested PCR products gel: The gel photograph represents the amplified fragments of promoter region carrying G238A in TNF-α gene by semi nested PCR. Lane 1: 50 bp ladder size marker; lanes 2, 3, and 4: 151-bp PCR product (semi-nested PCR); Lane 5: no template control
Fig. 3The gel photograph represents the digestion fragments with HpaII. Before HpaII digestion: Lanes 1,3, 5 and 7: 151-bp fragments. After HpaII digestion: Lane 2: 151-bp band representing the homozygous AA genotype (mutant type); Lanes 4 and 8: 133-bp band representing the homozygous GG genotype (wild type); Lane 6: 151- and 133-bp bands representing AG genotype (heterozygous)
Distribution of Genotypes and Allele Frequencies of rs361525 Polymorphism of TNF-α Gene in PCOS and Control Groups
| TNF-α (− 238; rs361525) | Normal | PCOS | |
|---|---|---|---|
| GG genotype | 96 (91.4) | 104 (93.7) | |
| AG genotype | 6 (5.7) | 6 (5.4) | |
| AA genotype | 3 (2.9) | 1 (0.9) |
n = Number of individuals; TNF-α; tumor necrosis factor-α, PCOS; polycystic ovary syndrome
Pearson Correlation Coefficients between TNF-α, HOMA-IR, BMI, and Triglyceride in the Study Subjects
| Factors | TNF-α | HOMA-IR | BMI | TG |
|---|---|---|---|---|
| TNF-α | 1 | – | – | – |
| HOMA-IR | 0.138* | 1 | – | – |
| BMI | 0.050 | 0.444** | 1 | – |
| TG | 0.113 | 0.263** | 0.395** | 1 |
*.Correlation is significant at the 0.05 level (p-value)
**.Correlation is significant at the 0.01 level (p-value)
Multiple Logistic Regression Analysis of Participants’ Characteristics
| Characteristic | OR (Exp) | 95% CI | |
|---|---|---|---|
| Age (years) | 0.95 | 0.88–1.02 | 0.17 |
| BMI (kg/m2) | 0.95 | 0.85–1.06 | 0.37 |
| E2 (pg/ml) | 0.97 | 0.96–0.99 | < 0.001* |
| Testosterone (pg/ml) | 1.73 | 0.84–3.59 | 0.13 |
| LH/FSH | 1.98 | 1.20–3.28 | 0.007* |
| HOMA factor | 5.04 | 2.82–9.01 | < 0.001* |
| TNF-α (pg/ml) | 1.26 | 0.82–1.93 | 0.29 |
| Triglycerides (mg/dl) | 1.01 | 1.00–1.02 | 0.08 |
Abbreviations: CI, confidence interval; OR, odds ratio; BMI, body mass index; E2, estradiol; HOMA-IR, homeostasis model assessment for insulin resistance; TNF-α, tumor necrosis factor-α, *indicates that this intity is significant statistically