| Literature DB >> 30134852 |
Manuela Lualdi1, Adalberto Cavalleri2, Luigi Battaglia3, Ambrogio Colombo4, Giulia Garrone2, Daniele Morelli5, Emanuele Pignoli6, Elisa Sottotetti7, Ermanno Leo3.
Abstract
BACKGROUND: An increase in naturally-occurring porphyrins has been described in the blood of subjects bearing different kinds of tumors, including colorectal, and this is probably related to a systemic alteration of heme metabolism induced by tumor cells. The aim of our study was to develop an artificial neural network (ANN) classifier for early detection of colorectal adenocarcinoma based on plasma porphyrin accumulation and risk factors.Entities:
Keywords: Colorectal cancer; Coproporphyrin I; Protoporphyrin IX; adenocarcinoma; native fluorescence; tumor marker
Mesh:
Substances:
Year: 2018 PMID: 30134852 PMCID: PMC6106935 DOI: 10.1186/s12885-018-4754-2
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Main demographic data of the enrolled subjects
| Demographic data | Patients (100) | Control subjects (112) | ||
|---|---|---|---|---|
| Gender | Female | Male | Female | Male |
| 42 | 58 | 56 | 56 | |
| Age [y]: median (range) | 65 (28–88) | 65 (46–88) | 56 (19–78) | 57 (23–82) |
| BMI [kg/m2] | ||||
| < 18.50 | 1 (2.4%) | 2 (3.4%) | 3 (5.4%) | 0 (0%) |
| 18.50–24.99 | 25 (59.5%) | 23 (39.7%) | 37 (66.1%) | 31 (55.4%) |
| 25.00–29.99 | 12 (28.6%) | 26 (44.8%) | 13 (23.2%) | 18 (32.1%) |
| ≥ 30.00 | 4 (9.5%) | 7 (12.1%) | 3 (5.4%) | 7 (12.5%) |
| Alcohol consumption [drinks/day] | ||||
| none | 19 (45.2%) | 6 (10.3%) | 32 (57.1%) | 26 (46.4%) |
| < 1 | 13 (31.0%) | 17 (29.3%) | 13 (23.2%) | 11 (19.6%) |
| ≥ 1 | 10 (23.8%) | 35 (60.4%) | 11 (19.6%) | 19 (34.0%) |
| Red meat intake [portions/week] | ||||
| none | 1 (2.4%) | 0 (0%) | 3 (5.4%) | 1 (1.8%) |
| 1–2 | 15 (35.7%) | 13 (22.4%) | 27 (48.2%) | 29 (51.8%) |
| 3–4 | 19 (45.2%) | 35 (60.4%) | 23 (41.1%) | 19 (33.9%) |
| > 4 | 7 (16.7%) | 10 (17.2%) | 3 (5.4%) | 7 (12.5%) |
| Vegetables [portions/day] | ||||
| none | 10 (23.8%) | 4 (6.9%) | 10 (17.9%) | 14 (25.0%) |
| 1 | 28 (66.7%) | 51 (87.9%) | 33 (58.9%) | 30 (53.6%) |
| > 1 | 4 (9.5%) | 3 (5.2%) | 13 (23.2%) | 12 (21.4%) |
| Smoking | ||||
| never smoker | 28 (66.7%) | 30 (51.7%) | 38 (67.9%) | 30 (53.6%) |
| former smoker | 5 (11.9%) | 17 (29.3%) | 7 (12.5%) | 14 (25.0%) |
| current smoker | 9 (21.4%) | 11 (19.0%) | 11 (19.6%) | 12 (21.4%) |
| Family history of CRC | ||||
| yes | 3 (7.1%) | 11 (19.0%) | 26 (46.4%) | 20 (35.7%) |
| no | 39 (92.9%) | 47 (81.0%) | 30 (53.6%) | 36 (64.3%) |
BMI body mass index
Performance of the artificial neural network classifier in differential diagnosis of colorectal adenocarcinoma in patients and controls
| Training set | Validation set | Test set | |
|---|---|---|---|
| Total population | 146 | 33 | 33 |
| Sensitivity | 88.9% | 84.6% | 86.7% |
| Specificity | 91.9% | 85.0% | 88.9% |
| NPV | 89.5% | 89.5% | 88.9% |
| PPV | 91.4% | 78.6% | 86.7% |
NPV Negative Predictive Value, PPV Positive Predictive Value
Fig. 1Receiver operating characteristic curve for the optimized artificial neural network classifier based on demographic data and the integral of the fluorescence emission peak in the range 610–650 nm. The area under the ROC curve was 0.828
Relative importance and rank of the input variables of the artificial neural network classifier
| Relative importance | Rank | |
|---|---|---|
| IF-INT | 78.73% | 1 |
| BMI | 10.22% | 2 |
| Family history for CRC | 5.01% | 3 |
| Red meat intake | 4.04% | 4 |
| Alcohol consumption | 1.30% | 5 |
| Smoking | 0.45% | 6 |
| Vegetable intake | 0.25% | 7 |
BMI body mass index
Chromatographic and spectrometric properties of the analytes involved in heme biosynthesis
| Porphyrin | Molecular formula | Theoretical M/Z ratio [M + H]+ | Experimental M/Z ratio [M + H]+ | RT [min] |
|---|---|---|---|---|
| Protoporphyrin IX | C34H34N4O4 | 563.2653 | 563.2651 | 6.88 |
| Iron protoporphyrin IX | C34H32FeN4O4 | 616.1768 | 616.1775 | 4.48 |
| Biliverdin | C33H34N4O6 | 583.2551 | 583.2565 | 2.96 |
| Coproporphyrin I | C36H38N4O8 | 655.2762 | 655.2775 | 1.85 |
| Protoporphyrin IX dimethylester | C36H38N4O4 | 591.2966 | 591.2961 | 8.06 |
M/Z Mass to charge ratio, RT Retention time
Fig. 2LC-HRMS chromatograms of: (a) standard solution of protoporphyrin IX (PpIX), iron protoporphyrin IX (FePpIX), biliverdin (Bv), coproporphyrin I (CpI) and protoporphyrin IX dimethyl ester (dmPpIX); (b) plasma sample of a control subject with low fluorescence emission in the range 610–650 nm; (c) plasma sample of a colorectal adenocarcinoma patient with high fluorescence emission in the range 610–650 nm