Literature DB >> 30129917

Flavobacterium effusum sp. nov., isolated from a freshwater river.

Wen-Ming Chen1, Ching-Ling Su2, Soon-Wo Kwon3, Shih-Yi Sheu2.   

Abstract

A yellowish-orange-coloured bacterial strain, PSI-22T, was isolated from a freshwater river in Taiwan. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain PSI-22T belonged to the genus Flavobacterium and showed the highest identity with respect to Flavobacterium dispersum MVW-23T (98.0 %), Flavobacterium tistrianum GB 56.1T (97.1 %), Flavobacterium denitrificans ED5T (97.1 %) and Flavobacterium daemonense THG-DJ7T (97.0 %) and less than 97 % to other members of the genus. Cells of strain PSI-22T were Gram-negative, strictly aerobic, motile by gliding and rod-shaped. Optimal growth occurred at 30 °C, pH 6 and in the presence of 0.5 % NaCl. Strain PSI-22T contained iso-C15 : 0 and summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c) as the predominant fatty acids. The polar lipid profile consisted of phosphatidylethanolamine, one uncharacterized aminophospholipid, one uncharacterized aminophosphoglycolipid, two uncharacterized aminolipids, one uncharacterized phospholipid and one uncharacterized lipid. The major polyamine was homospermidine. The major isoprenoid quinone was MK-6 and the DNA G+C content of the genomic DNA was 41.4 mol%. The DNA-DNA hybridization value for strain PSI-22T with F. dispersum BCRC 80978T, F. tistrianum KCTC 42679T, F. denitrificans DSM 15936T and F. daemonense KACC 17651T was less than 30 %. On the basis of the phylogenetic inference and phenotypic data, strain PSI-22T should be classified as a novel species, for which the name Flavobacterium effusum sp. nov. is proposed. The type strain is PSI-22T (=BCRC 80973T=LMG 29553T=KCTC 52233T).

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Keywords:  Bacteroidetes; Flavobacteriaceae; Flavobacterium effusum; freshwater; new taxa

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Year:  2018        PMID: 30129917     DOI: 10.1099/ijsem.0.002944

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  1 in total

1.  Comparison of the composition and function of gut microbes between adult and juvenile Cipangopaludina chinensis in the rice snail system.

Authors:  Kangqi Zhou; Junqi Qin; Haifeng Pang; Zhong Chen; Yin Huang; Wenhong Li; Xuesong Du; Luting Wen; Xianhui Pan; Yong Lin
Journal:  PeerJ       Date:  2022-03-08       Impact factor: 2.984

  1 in total

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