Literature DB >> 30129229

Pan-genome of cultivated pepper (Capsicum) and its use in gene presence-absence variation analyses.

Lijun Ou1, Dong Li2, Junheng Lv3, Wenchao Chen1, Zhuqing Zhang1, Xuefeng Li1, Bozhi Yang1, Shudong Zhou1, Sha Yang1, Weiguo Li2, Hongzhen Gao2, Qin Zeng2, Huiyang Yu4, Bo Ouyang4, Feng Li4, Feng Liu1, Jingyuan Zheng1, Yuhua Liu3, Jing Wang3, Bingbing Wang2, Xiongze Dai1, Yanqing Ma1, Xuexiao Zou1.   

Abstract

Keywords:  zzm321990Capsicumzzm321990; functional genomics; genetics; genome-wide association study (GWAS); pan-genome; presence-absence variations

Mesh：

Year:  2018        PMID： 30129229     DOI： 10.1111/nph.15413

Source DB:  PubMed          Journal:  New Phytol        ISSN： 0028-646X            Impact factor:   10.151


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  16 in total

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Review 2.  Omics-Facilitated Crop Improvement for Climate Resilience and Superior Nutritive Value.

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3.  Fine mapping of restorer-of-fertility gene based on high-density genetic mapping and collinearity analysis in pepper (Capsicum annuum L.).

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Review 5.  Genome sequences of horticultural plants: past, present, and future.

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6.  Pan-plastome approach empowers the assessment of genetic variation in cultivated Capsicum species.

Authors:  Mahmoud Magdy; Lijun Ou; Huiyang Yu; Rong Chen; Yuhong Zhou; Heba Hassan; Bihong Feng; Nathan Taitano; Esther van der Knaap; Xuexiao Zou; Feng Li; Bo Ouyang
Journal:  Hortic Res       Date:  2019-09-07       Impact factor: 6.793

7.  Target sequencing reveals genetic diversity, population structure, core-SNP markers, and fruit shape-associated loci in pepper varieties.

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Review 8.  The Genetic Basis of Tomato Aroma.

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Review 9.  Plant NLR diversity: the known unknowns of pan-NLRomes.

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10.  Whole genome resequencing of four Italian sweet pepper landraces provides insights on sequence variation in genes of agronomic value.

Authors:  Alberto Acquadro; Lorenzo Barchi; Ezio Portis; Mohamed Nourdine; Cristiano Carli; Simone Monge; Danila Valentino; Sergio Lanteri
Journal:  Sci Rep       Date:  2020-06-08       Impact factor: 4.379
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