| Literature DB >> 30124197 |
Philipp P Kohler, Roberto G Melano, Samir N Patel, Shumona Shafinaz, Amna Faheem, Brenda L Coleman, Karen Green, Irene Armstrong, Huda Almohri, Sergio Borgia, Emily Borgundvaag, Jennie Johnstone, Kevin Katz, Freda Lam, Matthew P Muller, Jeff Powis, Susan M Poutanen, David Richardson, Anu Rebbapragada, Alicia Sarabia, Andrew Simor, Allison McGeer.
Abstract
We analyzed population-based surveillance data from the Toronto Invasive Bacterial Diseases Network to describe carbapenemase-producing Enterobacteriaceae (CPE) infections during 2007-2015 in south-central Ontario, Canada. We reviewed patients' medical records and travel histories, analyzed microbiologic and clinical characteristics of CPE infections, and calculated incidence. Among 291 cases identified, New Delhi metallo-β-lactamase was the predominant carbapenemase (51%). The proportion of CPE-positive patients with prior admission to a hospital in Canada who had not received healthcare abroad or traveled to high-risk areas was 13% for patients with oxacillinase-48, 24% for patients with New Delhi metallo-β-lactamase, 55% for patients with Klebsiella pneumoniae carbapenemase, and 67% for patients with Verona integron-encoded metallo-β-lactamase. Incidence of CPE infection increased, reaching 0.33 cases/100,000 population in 2015. For a substantial proportion of patients, no healthcare abroad or high-risk travel could be established, suggesting CPE acquisition in Canada. Policy and practice changes are needed to mitigate nosocomial CPE transmission in hospitals in Canada.Entities:
Keywords: CPE; Canada; Ontario; antimicrobial resistance; bacteria; bacterial infections; beta-lactam resistance; carbapenem-resistant Enterobacteriaceae; drug resistance; incidence; population surveillance
Mesh:
Year: 2018 PMID: 30124197 PMCID: PMC6106407 DOI: 10.3201/eid2409.180164
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Isolate source and infection type among patients colonized or infected with carbapenemase-producing Enterobacteriaceae, Metropolitan Toronto and the Regional Municipality of Peel, south-central Ontario, Canada, 2007–2015*
| Characteristic | No. (%) | ||||
|---|---|---|---|---|---|
| All patients, n = 258 | Other,† n = 20 | ||||
| Isolate source‡ | |||||
| Only screening | 115 (45) | 58 (67) | 47 (39) | 6 (20) | 4 (20) |
|
| 149 (58) | 30 (35) | 79 (65) | 24 (80) | 16 (80) |
| Positive specimen types at first identification§ | |||||
| Rectal or colostomy | 138 (54) | 61 (71) | 64 (53) | 9 (30) | 4 (20) |
| Urine | 89 (35) | 19 (22) | 52 (43) | 11 (37) | 7 (35) |
| Blood | 21 (8) | 4 (5) | 9 (7) | 3 (10) | 5 (25) |
| Wound | 15 (6) | 2 (2) | 10 (8) | 1 (3.3) | 2 (10) |
| Sputum or broncoalveolar lavage | 12 (5) | 1 (1) | 6 (5) | 3 (10) | 2 (10) |
| Other | 17 (7) | 4 (5) | 5 (4) | 6 (20) | 2 (10) |
| Infection‡ | |||||
| Any | 92 (36) | 21¶ (24) | 46 (38) | 13 (43) | 12 (60) |
| Urinary tract | 75 (29) | 19 (22) | 46 (38) | 6 (20) | 4 (20) |
| Pneumonia | 13 (5) | 4 (5) | 3 (3) | 4 (13) | 2 (10) |
| Other# | 13 (5) | 3 (4) | 5 (4) | 3 (10) | 2 (15) |
| Primary bacteremia** | 13 (5) | 2 (2) | 4 (3) | 2 (7) | 1 (5) |
*Among first patient isolates; sums of specimen types exceed the number of patients because >1 specimen type may have yielded carbapenemase-producing Enterobacteriaceae. †Citrobacter spp. (n = 7), Morganella morganii (n = 4), Serratia marcescens (n = 4), Klebsiella oxytoca (n = 3), Providencia rettgeri (n = 1), Proteus mirabilis (n = 1). ‡Including all follow-up isolates available and all infections during the patients' hospitalization. §Including isolates from all specimens obtained within 2 days of the first positive specimen. ¶One patient originally colonized with a carbapenemase-producing E. coli subsequently experienced an infection with a carbapenemase-producing Enterobacter cloacae. #Includes 7 skin or soft tissue infections, 5 bone or joint infections, and 1 abdominal infection. **Patients with secondary bacteremia were classified according to their primary source of infection (urinary tract [n = 12] and pneumonia [n = 6]). Two bacteremic patients had both urinary tract infection and pneumonia diagnosed.
Figure 1Incidence of all carbapenemase-producing enterobacterial infections per 100,000 inhabitants, 2007–2015 (A), and bloodstream infections per 100,000 inhabitants, 2010–2015 (B), calculated by using a Poisson regression model, Metropolitan Toronto and the Regional Municipality of Peel, south-central Ontario, Canada, 2007–2015. Shading indicates 95% CI.
Characteristics of patients with carbapenemase-producing Enterobacteriaceae infections, by type of carbapenemase, Metropolitan Toronto and the Regional Municipality of Peel, south-central Ontario, Canada, 2007–2015*
| Patient characteristics and risk profile | All patients, n = 258† | NDM, n = 145 | KPC, n = 64 | OXA-48, n = 32 | VIM, n = 12 | p value‡ |
|---|---|---|---|---|---|---|
| Sex | ||||||
| M | 168 (65) | 94 (65) | 37 (58) | 25 (78) | 8 (67) | 0.32 |
| F | 90 (35) | 51 (35) | 27 (42) | 7 (22) | 4 (33) | |
| Age, y, median (IQR‡) | 70 (57–79) | 70 (59–79) | 70 (50–79) | 70 (52–77) | 77 (65–88) | 0.37 |
| Charlson index score >2§ | 88 (34) | 47 (32) | 25 (39) | 7 (22) | 7 (58) | 0.15 |
| Inpatient at time of diagnosis | 233 (90) | 129 (89) | 58 (91) | 29 (91) | 12 (100) | 0.85 |
| Days from admission to diagnosis, median (IQR)¶ | 2.5 (0–21) | 0 (0–11) | 14 (0–41) | 0 (0–11) | 19 (5–67) |
|
| CPE acquisition according to SHEA definitions# | ||||||
| Hospital acquired, hospital onset | 113 (44) | 55 (38) | 35 (55) | 12 (38) | 8 (67) | 0.10 |
| Hospital acquired, community onset | 70 (27) | 41 (28) | 21 (33) | 4 (13) | 3 (25) | 0.24 |
| Undetermined | 58 (23) | 40 (28) | 7 (11) | 11 (34) | 0 |
|
| Community acquired | 17 (7) | 9 (6) | 1 (2) | 5 (16) | 1 (8) | 0.12 |
| Residing in long-term care facility | 9 (4) | 2 (2) | 4 (7) | 0 | 3 (25) |
|
| Healthcare abroad or high-risk travel** | 142/238 (60) | 98/135 (73) | 22/59 (37) | 19/27 (70) | 3/12 (25) |
|
| Exposures and medical interventions†† | ||||||
| Intensive care stay | 78 (30) | 39 (27) | 26 (41) | 6 (19) | 5 (42) | 0.13 |
| Mechanical ventilation | 52 (20) | 24 (17) | 20 (31) | 3 (9) | 3 (25) | 0.11 |
| Previous surgery | 91 (35) | 29 (20) | 41 (64) | 13 (41) | 4 (33) |
|
| Central venous catheter | 86 (33) | 41 (28) | 32 (50) | 9 (28) | 2 (17) |
|
| Antibiotic exposure, any | 173 (67) | 92 (64) | 51 (80) | 16 (50) | 10 (83) |
|
| 3rd- and 4th-generation cephalosporins | 74 (29) | 40 (28) | 18 (28) | 7 (22) | 7 (58) | 0.16 |
| Carbapenems | 33 (13) | 14 (10) | 12 (19) | 3 (9) | 3 (25) | 0.17 |
| Quinolones | 81 (31) | 41 (28) | 26 (41) | 6 (19) | 7 (58) | 0.05 |
*Values are no. (%) except as indicated. All characteristics and risk profile descriptors apply to the 1-year period preceding CPE detection. CPE, carbapenemase-producing Enterobacteriaceae; IQR, interquartile range; KPC, Klebsiella pneumoniae carbapenemase; NDM, New Delhi metallo-β-lactamase; OXA-48, oxacillinase 48; SHEA, Society for Healthcare Epidemiology of America; VIM, Verona integron-encoded metallo-β-lactamase. †Three patients with Serratia marcescens enzyme and 2 with non–metallo-carbapenemase are not listed separately. ‡p values corrected for multiple testing with the Hochberg and Benjamini procedure. Bold type indicates statistical significance (p<0.05). §No significant differences observed for any comorbid conditions. ¶Only patients included where first isolate is a clinical sample (n = 126). #Defined as hospital acquired if hospital admission occurred within 90 days before CPE detection. **High-risk countries and the Indian subcontinent. Denominators indicate no. patients with travel information available. ††Not listed because of nonsignificance: bronchoscopy, cystoscopy, dialysis, Foley catheter, urostomy, colostomy, tracheostomy, blood transfusion, proton-pump inhibitors, steroids, chemotherapy, immunosuppression, previously identified antibiotic-resistant pathogens (e.g., methicillin-resistant Staphylococcus aureus and extended-spectrum β-lactamase).
Figure 2Healthcare visits abroad and travel history in patients with carbapenemase-producing Enterobacteriaceae infection in the 1 year before detection, stratified by type of carbapenemase, Metropolitan Toronto and the Regional Municipality of Peel, south-central Ontario, Canada, 2007–2015. Patients who traveled to any location other than the Indian subcontinent were classified as low-risk travel and indicated as no high-risk travel in the graph. n values indicate number of patients. KPC, Klebsiella pneumoniae carbapenemase; NDM, New Delhi metallo-β-lactamase; OXA-48, oxacillinase 48; VIM, Verona integron-encoded metallo-β-lactamase.
Figure 3Distribution of carbapenemases in 291 first isolates of carbapenemase-producing Enterobacteriaceae, by enterobacterial species (A) and region (B), Metropolitan Toronto and the Regional Municipality of Peel, south-central Ontario, Canada, 2007–2015. Other enterobacterial species were Serratia marcescens (n = 4), Klebsiella oxytoca (n = 3), Providencia rettgeri (n = 1), and Proteus mirabilis (n =1). Other carbapenemases or co-productions were NDM–OXA-48 (n = 2) and S. marcescens enzyme (n = 1). KPC, Klebsiella pneumoniae carbapenemase; NDM, New Delhi metallo-β-lactamase; OXA-48, oxacillinase 48; VIM, Verona integron-encoded metallo-β-lactamase.