Literature DB >> 30122450

Insights into Heptosyltransferase I Catalysis and Inhibition through the Structure of Its Ternary Complex.

Markus Blaukopf1, Liam Worrall2, Paul Kosma3, Natalie C J Strynadka2, Stephen G Withers4.   

Abstract

Heptosyltransferase I (WaaC) is a highly conserved glycosyltransferase found in Gram-negative bacteria that transfers a heptose residue onto the endotoxin inner core structure (ReLPS) of the outer membrane. Knockouts of WaaC have decreased virulence and increased susceptibility to antibiotics, making WaaC a potential drug target. While previous studies have elucidated the structure of the holoenzyme and a donor analog complex, no information on the binding mode of the acceptor has been available so far. By soaking of a chemically modified functional acceptor, along with a stable donor analog, the crystal structure of a pseudo-ternary complex of WaaC was obtained at 2.3-Å resolution. The acceptor is bound in an unusual horseshoe conformation stabilized by interaction of the anionic carboxylate and phosphate groups at its center and tips with highly conserved Lys and Arg residues. This binding is accompanied by both inter- and intra-domain movements within the protein.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  ADP-heptose; C-glycoside; Gram-negative bacteria; LPS biosynthesis; antivirulence; endotoxin; glycosyltransferase; heptosyltransferase; ternary complex

Mesh:

Substances:

Year:  2018        PMID: 30122450     DOI: 10.1016/j.str.2018.07.001

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  6 in total

1.  Opposites Attract: Escherichia coli Heptosyltransferase I Conformational Changes Induced by Interactions between the Substrate and Positively Charged Residues.

Authors:  Joy M Cote; Cody J S Hecht; Kaelan R Patel; Carlos A Ramirez-Mondragon; Yuk Y Sham; Erika A Taylor
Journal:  Biochemistry       Date:  2020-02-10       Impact factor: 3.162

Review 2.  Structural and mechanistic themes in glycoconjugate biosynthesis at membrane interfaces.

Authors:  Karen N Allen; Barbara Imperiali
Journal:  Curr Opin Struct Biol       Date:  2019-04-16       Impact factor: 6.809

3.  Ligand-Induced Conformational and Dynamical Changes in a GT-B Glycosyltransferase: Molecular Dynamics Simulations of Heptosyltransferase I Complexes.

Authors:  Bakar A Hassan; Jozafina Milicaj; Carlos Andres Ramirez-Mondragon; Yuk Yin Sham; Erika A Taylor
Journal:  J Chem Inf Model       Date:  2021-12-30       Impact factor: 4.956

4.  Conserved Conformational Hierarchy across Functionally Divergent Glycosyltransferases of the GT-B Structural Superfamily as Determined from Microsecond Molecular Dynamics.

Authors:  Carlos A Ramirez-Mondragon; Megin E Nguyen; Jozafina Milicaj; Bakar A Hassan; Frank J Tucci; Ramaiah Muthyala; Jiali Gao; Erika A Taylor; Yuk Y Sham
Journal:  Int J Mol Sci       Date:  2021-04-28       Impact factor: 5.923

5.  Discovery of first-in-class nanomolar inhibitors of heptosyltransferase I reveals a new aminoglycoside target and potential alternative mechanism of action.

Authors:  Jozafina Milicaj; Bakar A Hassan; Joy M Cote; Carlos A Ramirez-Mondragon; Nadiya Jaunbocus; Angelika Rafalowski; Kaelan R Patel; Colleen D Castro; Ramaiah Muthyala; Yuk Y Sham; Erika A Taylor
Journal:  Sci Rep       Date:  2022-05-04       Impact factor: 4.996

6.  Abundance of Lipopolysaccharide Heptosyltransferase I in Human Gut Microbiome and Its Association With Cardiovascular Disease and Liver Cirrhosis.

Authors:  Shujin Lin; Hui Zhang; Xueke Wang; Ting Lin; Zihan Chen; Jingfeng Liu; Jianmin Wang
Journal:  Front Microbiol       Date:  2021-11-30       Impact factor: 5.640

  6 in total

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