Literature DB >> 30119832

Telling Left from Right in Breathing Nucleosomes.

Helmut Schiessel1.   

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Year:  2018        PMID： 30119832      PMCID： PMC6127680          DOI： 10.1016/j.bpj.2018.07.026

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


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  11 in total

1.  Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites.

Authors:  J D Anderson; J Widom
Journal:  J Mol Biol       Date:  2000-03-03       Impact factor: 5.469

2.  Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II.

Authors:  Vladimir A Bondarenko; Louise M Steele; Andrea Ujvári; Daria A Gaykalova; Olga I Kulaeva; Yury S Polikanov; Donal S Luse; Vasily M Studitsky
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

3.  spFRET using alternating excitation and FCS reveals progressive DNA unwrapping in nucleosomes.

Authors:  W J A Koopmans; R Buning; T Schmidt; J van Noort
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

4.  New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning.

Authors:  P T Lowary; J Widom
Journal:  J Mol Biol       Date:  1998-02-13       Impact factor: 5.469

5.  Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation.

Authors:  K J Polach; J Widom
Journal:  J Mol Biol       Date:  1995-11-24       Impact factor: 5.469

6.  Local DNA Sequence Controls Asymmetry of DNA Unwrapping from Nucleosome Core Particles.

Authors:  Alexander W Mauney; Joshua M Tokuda; Lisa M Gloss; Oscar Gonzalez; Lois Pollack
Journal:  Biophys J       Date:  2018-07-31       Impact factor: 4.033

7.  Histone octamer rearranges to adapt to DNA unwrapping.

Authors:  Silvija Bilokapic; Mike Strauss; Mario Halic
Journal:  Nat Struct Mol Biol       Date:  2017-12-11       Impact factor: 15.369

8.  The role of DNA sequence in nucleosome breathing.

Authors:  Jamie Culkin; Lennart de Bruin; Marco Tompitak; Rob Phillips; Helmut Schiessel
Journal:  Eur Phys J E Soft Matter       Date:  2017-11-30       Impact factor: 1.890

9.  Asymmetric unwrapping of nucleosomes under tension directed by DNA local flexibility.

Authors:  Thuy T M Ngo; Qiucen Zhang; Ruobo Zhou; Jaya G Yodh; Taekjip Ha
Journal:  Cell       Date:  2015-03-12       Impact factor: 41.582

10.  Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal Promoters.

Authors:  René Dreos; Giovanna Ambrosini; Philipp Bucher
Journal:  PLoS Comput Biol       Date:  2016-10-07       Impact factor: 4.475
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  1 in total

1.  Ensembles of Breathing Nucleosomes: A Computational Study.

Authors:  Koen van Deelen; Helmut Schiessel; Lennart de Bruin
Journal:  Biophys J       Date:  2019-12-12       Impact factor: 4.033
  1 in total

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