Literature DB >> 30118781

Mitochondrial genome of the yellow catfish Pelteobagrus fulvidraco and insights into Bagridae phylogenetics.

Yu Liu1, Pei-Dong Wu2, Dai-Zhen Zhang2, Hua-Bin Zhang3, Bo-Ping Tang2, Qiu-Ning Liu4, Li-Shang Dai5.   

Abstract

The mitochondrial genome (mitogenome) can provide important information for understanding phylogenetic analysis and molecular evolution. Herein, we amplified the complete mitogenome sequence of Pelteobagrus fulvidraco. The mitogenome was 16,526 bp in length and included 13 protein-coding genes (PCGs), 22 transfer RNA genes, two ribosomal RNA genes and a non-coding control region (D-loop). Both the organization and location of genes in the mitogenome were consistent with those from Siluriformes fishes previously published in GenBank. The phylogenetic relationships based on Bayesian inference (BI) and Maximum likelihood (ML) methods showed that P. fulvidraco has close relationships with Pelteobagrus eupogon and Tachysurus intermedius, suggesting that P. fulvidraco belongs to Tachysurus. This study provides evidence that Tachysurus, Pseudobagrus and Leiocassis do not form monophyly, but that these three genera form a monophyletic group. Our results provide reference for further phylogenetic research of the Bagridae species.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  Mitochondrial genome; Pelteobagrus fulvidraco; Phylogeny

Mesh:

Substances:

Year:  2018        PMID: 30118781     DOI: 10.1016/j.ygeno.2018.08.005

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  8 in total

1.  Novel Gene Rearrangement in the Mitochondrial Genome of Three Garra and Insights Into the Phylogenetic Relationships of Labeoninae.

Authors:  Chi Zhang; Kun Zhang; Ying Peng; Jianshe Zhou; Yifan Liu; Bingjian Liu
Journal:  Front Genet       Date:  2022-06-08       Impact factor: 4.772

2.  The Complete Mitochondrial Genome of Stichopus naso (Aspidochirotida: Stichopodidae: Stichopus) and Its Phylogenetic Position.

Authors:  Zhuobo Li; Bo Ma; Xiaomin Li; Ying Lv; Xiao Jiang; Chunhua Ren; Chaoqun Hu; Peng Luo
Journal:  Genes (Basel)       Date:  2022-05-05       Impact factor: 4.141

3.  Novel gene rearrangement in the mitochondrial genome of Muraenesox cinereus and the phylogenetic relationship of Anguilliformes.

Authors:  Kun Zhang; Kehua Zhu; Yifan Liu; Hua Zhang; Li Gong; Lihua Jiang; Liqin Liu; Zhenming Lü; Bingjian Liu
Journal:  Sci Rep       Date:  2021-01-28       Impact factor: 4.379

4.  The complete mitochondrial genome of a bagrid catfish, Tachysurus nudiceps, and its phylogenetic implications for the classification of the bagrid genera.

Authors:  Syuri Hashimoto; Ryosuke Kakehashi; Tsuyoshi Mori; Chiaki Kambayashi; Shigefumi Kanao; Atsushi Kurabayashi
Journal:  Mitochondrial DNA B Resour       Date:  2022-04-01       Impact factor: 0.658

5.  Characterization of a Novel RNA Virus Causing Massive Mortality in Yellow Catfish, Pelteobagrus fulvidraco, as an Emerging Genus in Caliciviridae (Picornavirales).

Authors:  Wenzhi Liu; Mingyang Xue; Tao Yang; Yiqun Li; Nan Jiang; Yuding Fan; Yan Meng; Xiaowen Luo; Yong Zhou; Lingbing Zeng
Journal:  Microbiol Spectr       Date:  2022-08-04

6.  Adaptability and Evolution of Gobiidae: A Genetic Exploration.

Authors:  Yongquan Shang; Xibao Wang; Gang Liu; Xiaoyang Wu; Qinguo Wei; Guolei Sun; Xuesong Mei; Yuehuan Dong; Weilai Sha; Honghai Zhang
Journal:  Animals (Basel)       Date:  2022-07-06       Impact factor: 3.231

7.  Comparative Mitogenomics of Two Sympatric Catfishes of Exostoma (Siluriformes: Sisoridae) from the Lower Yarlung Tsangpo River and Its Application for Phylogenetic Consideration.

Authors:  Zheng Gong; Wanxiang Jiang; Huizhe Feng; Yanchao Liu; Tianshun Zhu
Journal:  Genes (Basel)       Date:  2022-09-08       Impact factor: 4.141

8.  Chromosome-level genome assembly of the Chinese longsnout catfish Leiocassis longirostris.

Authors:  Wen-Ping He; Jian Zhou; Zhe Li; Ting-Sen Jing; Chun-Hua Li; Yue-Jing Yang; Meng-Bin Xiang; Chao-Wei Zhou; Guang-Jun Lv; Hong-Yan Xu; Hui Luo; Hua Ye
Journal:  Zool Res       Date:  2021-07-18
  8 in total

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