Literature DB >> 30118050

Study on baseline correction methods for the Fourier transform infrared spectra with different signal-to-noise ratios.

Xianchun Shen, Shubin Ye, Liang Xu, Rong Hu, Ling Jin, Hanyang Xu, Jianguo Liu, Wenqing Liu.   

Abstract

Removing the baseline from the spectra, which are measured by a Fourier transform infrared spectrometer (FTIR), is an important preprocessing step for further spectra analysis such as quantitative and qualitative analysis. An automatic baseline correction method named iterative averaging, which is based on the basic knowledge of moving average, is presented. We also compared it to other methods, such as rubber band, adaptive iterative reweight penalized least squares, automatic iterative moving average, and morphological weighted penalized least squares, using simulated and experimental spectra with different signal-to-noise ratios (SNRs) to evaluate the performance of these methods by performance metrics and to select an appropriate method to analyze FTIR spectra. Performance metrics such as root-mean-square error, goodness-of-fit coefficient, and chi-square are calculated. The iterative averaging method achieves the best results, which are judged by performance metrics values, when it is applied to the FTIR spectra with different SNRs. It also can correct the baseline of the FTIR spectra automatically, and improve the capability and adaptability of the unsupervised online analysis of the FTIR system effectively.

Year:  2018        PMID: 30118050     DOI: 10.1364/AO.57.005794

Source DB:  PubMed          Journal:  Appl Opt        ISSN: 1559-128X            Impact factor:   1.980


  3 in total

1.  Reagent-free total protein quantification of intact extracellular vesicles by attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy.

Authors:  Veronika Szentirmai; András Wacha; Csaba Németh; Diána Kitka; Anita Rácz; Károly Héberger; Judith Mihály; Zoltán Varga
Journal:  Anal Bioanal Chem       Date:  2020-05-29       Impact factor: 4.142

2.  A general-purpose signal processing algorithm for biological profiles using only first-order derivative information.

Authors:  Yuanjie Liu; Jianhan Lin
Journal:  BMC Bioinformatics       Date:  2019-11-27       Impact factor: 3.169

3.  An Automatic Baseline Correction Method Based on the Penalized Least Squares Method.

Authors:  Feng Zhang; Xiaojun Tang; Angxin Tong; Bin Wang; Jingwei Wang
Journal:  Sensors (Basel)       Date:  2020-04-03       Impact factor: 3.576

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.