Literature DB >> 30117837

Efficient illumination angle self-calibration in Fourier ptychography.

Regina Eckert, Zachary F Phillips, Laura Waller.   

Abstract

Fourier ptychography captures intensity images with varying source patterns (illumination angles) in order to computationally reconstruct large space-bandwidth-product images. Accurate knowledge of the illumination angles is necessary for good image quality; hence, calibration methods are crucial, despite often being impractical or slow. Here, we propose a fast, robust, and accurate self-calibration algorithm that uses only experimentally collected data and general knowledge of the illumination setup. First, our algorithm makes a fast direct estimate of the brightfield illumination angles based on image processing. Then, a more computationally intensive spectral correlation method is used inside the iterative solver to further refine the angle estimates of both brightfield and darkfield images. We demonstrate our method for correcting large and small misalignment artifacts in 2D and 3D Fourier ptychography with different source types: an LED array, a galvo-steered laser, and a high-NA quasi-dome LED illuminator.

Entities:  

Year:  2018        PMID: 30117837     DOI: 10.1364/AO.57.005434

Source DB:  PubMed          Journal:  Appl Opt        ISSN: 1559-128X            Impact factor:   1.980


  13 in total

1.  Reliable deep-learning-based phase imaging with uncertainty quantification.

Authors:  Yujia Xue; Shiyi Cheng; Yunzhe Li; Lei Tian
Journal:  Optica       Date:  2019-05-07       Impact factor: 11.104

2.  Learned sensing: jointly optimized microscope hardware for accurate image classification.

Authors:  Alex Muthumbi; Amey Chaware; Kanghyun Kim; Kevin C Zhou; Pavan Chandra Konda; Richard Chen; Benjamin Judkewitz; Andreas Erdmann; Barbara Kappes; Roarke Horstmeyer
Journal:  Biomed Opt Express       Date:  2019-11-19       Impact factor: 3.732

3.  High-resolution 3D Fourier ptychographic reconstruction using a hemispherical illumination source with multiplexed-coded strategy.

Authors:  Minglu Sun; Lina Shao; Jinrui Zhang; Youqiang Zhu; Peilin Wu; Yukun Wang; Zhihui Diao; QuanQuan Mu; Dayu Li; Hongda Wang; Li Xuan
Journal:  Biomed Opt Express       Date:  2022-03-14       Impact factor: 3.732

4.  Synthetic aperture interference light (SAIL) microscopy for high-throughput label-free imaging.

Authors:  Chenfei Hu; Mikhail E Kandel; Young Jae Lee; Gabriel Popescu
Journal:  Appl Phys Lett       Date:  2021-12-08       Impact factor: 3.791

5.  Self-calibrated 3D differential phase contrast microscopy with optimized illumination.

Authors:  Ruiming Cao; Michael Kellman; David Ren; Regina Eckert; Laura Waller
Journal:  Biomed Opt Express       Date:  2022-02-24       Impact factor: 3.732

6.  Fourier ptychography multi-parameunter neural network with composite physical priori optimization.

Authors:  Delong Yang; Shaohui Zhang; Chuanjian Zheng; Guocheng Zhou; Lei Cao; Yao Hu; Qun Hao
Journal:  Biomed Opt Express       Date:  2022-04-11       Impact factor: 3.562

7.  Automated wide-field malaria parasite infection detection using Fourier ptychography on stain-free thin-smears.

Authors:  Osman Akcakır; Lutfi Kadir Celebi; Mohd Kamil; Ahmed S I Aly
Journal:  Biomed Opt Express       Date:  2022-06-15       Impact factor: 3.562

8.  Implementation of free-space Fourier Ptychography with near maximum system numerical aperture.

Authors:  Mingshu Liang; Changhuei Yang
Journal:  Opt Express       Date:  2022-06-06       Impact factor: 3.833

9.  Integration of Fourier ptychography with machine learning: an alternative scheme.

Authors:  Yiwen Chen; Tingfa Xu; Haixin Sun; Jizhou Zhang; Bo Huang; Jinhua Zhang; Jianan Li
Journal:  Biomed Opt Express       Date:  2022-07-21       Impact factor: 3.562

10.  Robust full-pose-parameter estimation for the LED array in Fourier ptychographic microscopy.

Authors:  Chuanjian Zheng; Shaohui Zhang; Delong Yang; Guocheng Zhou; Yao Hu; Qun Hao
Journal:  Biomed Opt Express       Date:  2022-08-01       Impact factor: 3.562

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