Literature DB >> 30115950

Whole-exome sequencing reveals known and novel variants in a cohort of intracranial vertebral-basilar artery dissection (IVAD).

Kun Wang1, Sen Zhao2,3,4, Qianqian Zhang1, Jian Yuan5, Jiaqi Liu2,3,6, Xinghuan Ding1, Xiaofei Song7, Jiachen Lin4, Renqian Du7, Yangzhong Zhou2,3,8, Michihiko Sugimoto9, Weisheng Chen2,3,4, Bo Yuan7, Jian Liu1, Zihui Yan2,3,4, Bowen Liu2,3,4, Yisen Zhang1, Xiaoxin Li2,3,10, Yuchen Niu2,3,10, Bo Long10, Yiping Shen11,12, Shuyang Zhang13, Kuniya Abe9, Jianzhong Su5, Zhihong Wu1,2,3, Nan Wu14,15,16, Pengfei Liu17, Xinjian Yang18.   

Abstract

Intracranial vertebral-basilar artery dissection (IVAD) is an arterial disorder leading to life-threatening consequences. Genetic factors are known to be causative to certain syndromic forms of IVAD. However, systematic study of the molecular basis of sporadic and isolated IVAD is lacking. To identify genetic variants contributing to the etiology of IVAD, we enrolled a cohort of 44 unrelated cases with a clinical diagnosis of isolated IVAD and performed whole-exome sequencing (WES) for all the participants; a trio exome sequencing approach was used when samples from both parents were available. Four previously reported disease-causing heterozygous variants (three in COL3A1 and one in FBN1) and seven novel heterozygous variants in IVAD-related genes were identified. In addition, six variants in novel IVAD genes including two de novo heterozygous nonsynonymous variants (each in VPS52 and CDK18), two stop-gain variants (each in MYH9 and LYL1), and two heterozygous biallelic variants in TNXB were considered to be possibly contributing to the phenotype, with unknown significance according to the existing knowledge. A significantly higher mutational rate of IVAD candidate genes was observed in patients versus our in-house controls (P = 0.002) (DISCO study, http://www.discostudy.org/ , n = 2248). Our study provided a mutational landscape for patients with isolated IVAD.

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Year:  2018        PMID: 30115950     DOI: 10.1038/s10038-018-0496-x

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  30 in total

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Authors:  James R Lupski; John W Belmont; Eric Boerwinkle; Richard A Gibbs
Journal:  Cell       Date:  2011-09-30       Impact factor: 41.582

2.  A recessive form of the Ehlers-Danlos syndrome caused by tenascin-X deficiency.

Authors:  J Schalkwijk; M C Zweers; P M Steijlen; W B Dean; G Taylor; I M van Vlijmen; B van Haren; W L Miller; J Bristow
Journal:  N Engl J Med       Date:  2001-10-18       Impact factor: 91.245

3.  Heavy chain myosin 9-related disease (MYH9 -RD): neutrophil inclusions of myosin-9 as a pathognomonic sign of the disorder.

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Journal:  Thromb Haemost       Date:  2010-02-19       Impact factor: 5.249

4.  Vertebrobasilar dissection with subarachnoid hemorrhage: a retrospective study of 29 patients.

Authors:  B Ramgren; M Cronqvist; B Romner; L Brandt; S Holtås; E-M Larsson
Journal:  Neuroradiology       Date:  2005-02-16       Impact factor: 2.804

5.  G to T transversion at position +5 of a splice donor site causes skipping of the preceding exon in the type III procollagen transcripts of a patient with Ehlers-Danlos syndrome type IV.

Authors:  B Lee; E Vitale; A Superti-Furga; B Steinmann; F Ramirez
Journal:  J Biol Chem       Date:  1991-03-15       Impact factor: 5.157

6.  Molecular identification of t(w5): Vps52 promotes pluripotential cell differentiation through cell-cell interactions.

Authors:  Michihiko Sugimoto; Masayo Kondo; Michiko Hirose; Misao Suzuki; Kazuyuki Mekada; Takaya Abe; Hiroshi Kiyonari; Atsuo Ogura; Nobuo Takagi; Karen Artzt; Kuniya Abe
Journal:  Cell Rep       Date:  2012-11-08       Impact factor: 9.423

7.  Common variation in PHACTR1 is associated with susceptibility to cervical artery dissection.

Authors:  Stéphanie Debette; Yoichiro Kamatani; Tiina M Metso; Manja Kloss; Ganesh Chauhan; Stefan T Engelter; Alessandro Pezzini; Vincent Thijs; Hugh S Markus; Martin Dichgans; Christiane Wolf; Ralf Dittrich; Emmanuel Touzé; Andrew M Southerland; Yves Samson; Shérine Abboud; Yannick Béjot; Valeria Caso; Anna Bersano; Andreas Gschwendtner; Maria Sessa; John Cole; Chantal Lamy; Elisabeth Medeiros; Simone Beretta; Leo H Bonati; Armin J Grau; Patrik Michel; Jennifer J Majersik; Pankaj Sharma; Ludmila Kalashnikova; Maria Nazarova; Larisa Dobrynina; Eva Bartels; Benoit Guillon; Evita G van den Herik; Israel Fernandez-Cadenas; Katarina Jood; Michael A Nalls; Frank-Erik De Leeuw; Christina Jern; Yu-Ching Cheng; Inge Werner; Antti J Metso; Christoph Lichy; Philippe A Lyrer; Tobias Brandt; Giorgio B Boncoraglio; Heinz-Erich Wichmann; Christian Gieger; Andrew D Johnson; Thomas Böttcher; Maurizio Castellano; Dominique Arveiler; M Arfan Ikram; Monique M B Breteler; Alessandro Padovani; James F Meschia; Gregor Kuhlenbäumer; Arndt Rolfs; Bradford B Worrall; Erich-Bernd Ringelstein; Diana Zelenika; Turgut Tatlisumak; Mark Lathrop; Didier Leys; Philippe Amouyel; Jean Dallongeville
Journal:  Nat Genet       Date:  2014-11-24       Impact factor: 38.330

8.  Connective tissue anomalies in patients with spontaneous cervical artery dissection.

Authors:  Alessia Giossi; Marco Ritelli; Paolo Costa; Andrea Morotti; Loris Poli; Elisabetta Del Zotto; Irene Volonghi; Nicola Chiarelli; Massimo Gamba; Paolo Bovi; Giampaolo Tomelleri; Monica Carletti; Nicoletta Checcarelli; Giorgio Meneghetti; Michele Morra; Mauro Chinaglia; Valeria De Giuli; Marina Colombi; Alessandro Padovani; Alessandro Pezzini
Journal:  Neurology       Date:  2014-10-29       Impact factor: 9.910

9.  Plasma homocysteine concentration, C677T MTHFR genotype, and 844ins68bp CBS genotype in young adults with spontaneous cervical artery dissection and atherothrombotic stroke.

Authors:  Alessandro Pezzini; Elisabetta Del Zotto; Silvana Archetti; Riccardo Negrini; Paolo Bani; Alberto Albertini; Mario Grassi; Deodato Assanelli; Roberto Gasparotti; Luigi Amedeo Vignolo; Mauro Magoni; Alessandro Padovani
Journal:  Stroke       Date:  2002-03       Impact factor: 7.914

10.  LYL1 activity is required for the maturation of newly formed blood vessels in adulthood.

Authors:  Nelly Pirot; Virginie Deleuze; Rawan El-Hajj; Christiane Dohet; Fred Sablitzky; Philippe Couttet; Danièle Mathieu; Valérie Pinet
Journal:  Blood       Date:  2010-04-23       Impact factor: 22.113

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  8 in total

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Authors:  Xinghuan Ding; Sen Zhao; Qianqian Zhang; Zihui Yan; Yang Wang; Yong Wu; Xiaoxin Li; Jian Liu; Yuchen Niu; Yisen Zhang; Mingqi Zhang; Huizi Wang; Ying Zhang; Weisheng Chen; Xin-Zhuang Yang; Pengfei Liu; Jennifer E Posey; James R Lupski; Zhihong Wu; Xinjian Yang; Nan Wu; Kun Wang
Journal:  J Neurointerv Surg       Date:  2019-08-10       Impact factor: 5.836

2.  Whole-Genome Methylation Analysis of Phenotype Discordant Monozygotic Twins Reveals Novel Epigenetic Perturbation Contributing to the Pathogenesis of Adolescent Idiopathic Scoliosis.

Authors:  Gang Liu; Lianlei Wang; Xinyu Wang; Zihui Yan; Xinzhuang Yang; Mao Lin; Sen Liu; Yuzhi Zuo; Yuchen Niu; Sen Zhao; Yanxue Zhao; Jianguo Zhang; Jianxiong Shen; Yipeng Wang; Guixing Qiu; Zhihong Wu; Nan Wu
Journal:  Front Bioeng Biotechnol       Date:  2019-12-10

3.  Treatment of pediatric intracranial dissecting aneurysm with clipping and angioplasty, and next-generation sequencing analysis: A case report and literature review.

Authors:  Ning Sun; Xin-Yu Yang; Yan Zhao; Qing-Jiang Zhang; Xiao Ma; Zhong-Nan Wei; Meng-Qi Li
Journal:  World J Clin Cases       Date:  2021-02-16       Impact factor: 1.337

4.  Delineation of dual molecular diagnosis in patients with skeletal deformity.

Authors:  Lian Liu; Liying Sun; Yujun Chen; Muchuan Wang; Chenxi Yu; Yingzhao Huang; Sen Zhao; Huakang Du; Shaoke Chen; Xin Fan; Wen Tian; Zhihong Wu; Guixing Qiu; Terry Jianguo Zhang; Nan Wu
Journal:  Orphanet J Rare Dis       Date:  2022-03-28       Impact factor: 4.123

5.  Head/neck pain characteristics after spontaneous cervical artery dissection in the acute phase and on a long-run.

Authors:  Lukas Mayer-Suess; Florian Frank; Thomas Töll; Christian Boehme; Elke R Gizewski; Gudrun Ratzinger; Gregor Broessner; Stefan Kiechl; Michael Knoflach
Journal:  Cephalalgia       Date:  2022-03-18       Impact factor: 6.075

6.  Rare genetic variants in patients with cervical artery dissection.

Authors:  Christopher Traenka; Manja Kloss; Tim Strom; Philippe Lyrer; Tobias Brandt; Leo H Bonati; Caspar Grond-Ginsbach; Stefan Engelter
Journal:  Eur Stroke J       Date:  2019-07-12

7.  A novel COMP mutation in a Chinese family with multiple epiphyseal dysplasia.

Authors:  Jiashen Shao; Sen Zhao; Zihui Yan; Lianlei Wang; Yuanqiang Zhang; Mao Lin; Chenxi Yu; Shengru Wang; Yuchen Niu; Xiaoxin Li; Guixing Qiu; Jianguo Zhang; Zhihong Wu; Nan Wu
Journal:  BMC Med Genet       Date:  2020-05-27       Impact factor: 2.103

8.  Phenotypic and genetic spectrum of isolated macrodactyly: somatic mosaicism of PIK3CA and AKT1 oncogenic variants.

Authors:  Wen Tian; Yingzhao Huang; Liying Sun; Yang Guo; Sen Zhao; Mao Lin; Xiying Dong; Wenyao Zhong; Yuehan Yin; Zefu Chen; Nan Zhang; Yuanqiang Zhang; Lianlei Wang; Jiachen Lin; Zihui Yan; Xinzhuang Yang; Junhui Zhao; Guixing Qiu; Jianguo Zhang; Zhihong Wu; Nan Wu
Journal:  Orphanet J Rare Dis       Date:  2020-10-14       Impact factor: 4.123

  8 in total

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