Literature DB >> 30113902

Anatomical Structure Segmentation in Ultrasound Volumes Using Cross Frame Belief Propagating Iterative Random Walks.

Debarghya China, Alfredo Illanes, Prabal Poudel, Michael Friebe, Pabitra Mitra, Debdoot Sheet.   

Abstract

Ultrasound (US) is widely used as a low-cost alternative to computed tomography or magnetic resonance and primarily for preliminary imaging. Since speckle intensity in US images is inherently stochastic, readers are often challenged in their ability to identify the pathological regions in a volume of a large number of images. This paper introduces a generalized approach for volumetric segmentation of structures in US images and volumes. We employ an iterative random walks (IRW) solver, a random forest learning model, and a gradient vector flow (GVF) based interframe belief propagation technique for achieving cross-frame volumetric segmentation. At the start, a weak estimate of the tissue structure is obtained using estimates of parameters of a statistical mechanics model of US tissue interaction. Ensemble learning of these parameters further using a random forest is used to initialize the segmentation pipeline. IRW is used for correcting the contour in various steps of the algorithm. Subsequently, a GVF-based interframe belief propagation is applied to adjacent frames based on the initialization of contour using information in the current frame to segment the complete volume by frame-wise processing. We have experimentally evaluated our approach using two different datasets. Intravascular ultrasound (IVUS) segmentation was evaluated using 10 pullbacks acquired at 20 MHz and thyroid US segmentation is evaluated on 16 volumes acquired at [Formula: see text] MHz. Our approach obtains a Jaccard score of [Formula: see text] for IVUS segmentation and [Formula: see text] for thyroid segmentation while processing each frame in [Formula: see text] for the IVUS and in [Formula: see text] for thyroid segmentation without the need of any computing accelerators such as GPUs.

Year:  2018        PMID: 30113902     DOI: 10.1109/JBHI.2018.2864896

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  2 in total

1.  Parametrical modelling for texture characterization-A novel approach applied to ultrasound thyroid segmentation.

Authors:  Alfredo Illanes; Nazila Esmaeili; Prabal Poudel; Sathish Balakrishnan; Michael Friebe
Journal:  PLoS One       Date:  2019-01-29       Impact factor: 3.240

2.  Tracked 3D ultrasound and deep neural network-based thyroid segmentation reduce interobserver variability in thyroid volumetry.

Authors:  Markus Krönke; Christine Eilers; Desislava Dimova; Melanie Köhler; Gabriel Buschner; Lilit Schweiger; Lemonia Konstantinidou; Marcus Makowski; James Nagarajah; Nassir Navab; Wolfgang Weber; Thomas Wendler
Journal:  PLoS One       Date:  2022-07-29       Impact factor: 3.752

  2 in total

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