Literature DB >> 30111830

Understanding explosive diversification through cichlid fish genomics.

Walter Salzburger1.   

Abstract

Owing to their taxonomic, phenotypic, ecological and behavioural diversity and propensity for explosive diversification, the assemblages of cichlid fish in the East African Great Lakes Victoria, Malawi and Tanganyika are important role models in evolutionary biology. With the release of five reference genomes and many additional genomic resources, as well as the establishment of functional genomic tools, the cichlid system has fully entered the genomic era. The in-depth genomic exploration of the East African cichlid fauna - in combination with the examination of their ecology, morphology and behaviour - permits novel insights into the way organisms diversify.

Mesh:

Year:  2018        PMID: 30111830     DOI: 10.1038/s41576-018-0043-9

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  51 in total

1.  Interspecific hybridization can generate functional novelty in cichlid fish.

Authors:  O M Selz; O Seehausen
Journal:  Proc Biol Sci       Date:  2019-10-23       Impact factor: 5.349

2.  Comparing Adaptive Radiations Across Space, Time, and Taxa.

Authors:  Rosemary G Gillespie; Gordon M Bennett; Luc De Meester; Jeffrey L Feder; Robert C Fleischer; Luke J Harmon; Andrew P Hendry; Matthew L Knope; James Mallet; Christopher Martin; Christine E Parent; Austin H Patton; Karin S Pfennig; Daniel Rubinoff; Dolph Schluter; Ole Seehausen; Kerry L Shaw; Elizabeth Stacy; Martin Stervander; James T Stroud; Catherine Wagner; Guinevere O U Wogan
Journal:  J Hered       Date:  2020-02-05       Impact factor: 2.645

3.  The Genomic Substrate for Adaptive Radiation: Copy Number Variation across 12 Tribes of African Cichlid Species.

Authors:  Joshua J Faber-Hammond; Etienne Bezault; David H Lunt; Domino A Joyce; Suzy C P Renn
Journal:  Genome Biol Evol       Date:  2019-10-01       Impact factor: 3.416

4.  Holosteans contextualize the role of the teleost genome duplication in promoting the rise of evolutionary novelties in the ray-finned fish innate immune system.

Authors:  Alex Dornburg; Dustin J Wcisel; Katerina Zapfe; Emma Ferraro; Lindsay Roupe-Abrams; Andrew W Thompson; Ingo Braasch; Tatsuya Ota; Jeffrey A Yoder
Journal:  Immunogenetics       Date:  2021-09-11       Impact factor: 2.846

5.  Drivers and dynamics of a massive adaptive radiation in cichlid fishes.

Authors:  Fabrizia Ronco; Michael Matschiner; Astrid Böhne; Anna Boila; Heinz H Büscher; Athimed El Taher; Adrian Indermaur; Milan Malinsky; Virginie Ricci; Ansgar Kahmen; Sissel Jentoft; Walter Salzburger
Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

6.  Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna.

Authors:  Thomas L P Couvreur; Pierre Sepulchre; Gilles Dauby; Anne Blach-Overgaard; Vincent Deblauwe; Steven Dessein; Vincent Droissart; Oliver J Hardy; David J Harris; Steven B Janssens; Alexandra C Ley; Barbara A Mackinder; Bonaventure Sonké; Marc S M Sosef; Tariq Stévart; Jens-Christian Svenning; Jan J Wieringa; Adama Faye; Alain D Missoup; Krystal A Tolley; Violaine Nicolas; Stéphan Ntie; Frédiéric Fluteau; Cécile Robin; Francois Guillocheau; Doris Barboni
Journal:  Biol Rev Camb Philos Soc       Date:  2020-09-13

7.  Hybridization increases population variation during adaptive radiation.

Authors:  Peter R Grant; B Rosemary Grant
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

8.  Triad hybridization via a conduit species.

Authors:  Peter R Grant; B Rosemary Grant
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-25       Impact factor: 11.205

9.  Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation.

Authors:  Haruna Nakamura; Mitsuto Aibara; Rei Kajitani; Hillary D J Mrosso; Semvua I Mzighani; Atsushi Toyoda; Takehiko Itoh; Norihiro Okada; Masato Nikaido
Journal:  Mol Biol Evol       Date:  2021-07-29       Impact factor: 16.240

10.  Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika.

Authors:  Patricia Q Tran; Samantha C Bachand; Peter B McIntyre; Benjamin M Kraemer; Yvonne Vadeboncoeur; Ismael A Kimirei; Rashid Tamatamah; Katherine D McMahon; Karthik Anantharaman
Journal:  ISME J       Date:  2021-02-09       Impact factor: 10.302

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