Literature DB >> 30111665

Understanding diseases as increased heterogeneity: a complex network computational framework.

Massimiliano Zanin1, Juan Manuel Tuñas2, Ernestina Menasalvas2.   

Abstract

Owing to the complexity of the human body, most diseases present a high interpersonal variability in the way they manifest, i.e. in their phenotype, which has important clinical repercussions-for instance, the difficulty in defining objective diagnostic rules. Here we explore the hypothesis that signs and symptoms used to define a disease should be understood in terms of the dispersion (as opposed to the average) of physical observables. To that end, we propose a computational framework, based on complex networks theory, to map groups of subjects to a network structure, based on their pairwise phenotypical similarity. We demonstrate that the resulting structure can be used to improve the performance of classification algorithms, especially in the case of a limited number of instances, with both synthetic and real datasets. Beyond providing an alternative conceptual understanding of diseases, the proposed framework could be of special relevance in the growing field of personalized, or N-to-1, medicine.
© 2018 The Author(s).

Entities:  

Keywords:  complex networks; data analysis; personalized medicine

Mesh:

Year:  2018        PMID: 30111665      PMCID: PMC6127182          DOI: 10.1098/rsif.2018.0405

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  36 in total

1.  Phonatory impairment in Parkinson's disease: evidence from nonlinear dynamic analysis and perturbation analysis.

Authors:  Douglas A Rahn; Maggie Chou; Jack J Jiang; Yu Zhang
Journal:  J Voice       Date:  2005-12-27       Impact factor: 2.009

2.  Cerebral cortex and the clinical expression of Huntington's disease: complexity and heterogeneity.

Authors:  H Diana Rosas; David H Salat; Stephanie Y Lee; Alexandra K Zaleta; Vasanth Pappu; Bruce Fischl; Doug Greve; Nathanael Hevelone; Steven M Hersch
Journal:  Brain       Date:  2008-03-12       Impact factor: 13.501

3.  The human disease network.

Authors:  Kwang-Il Goh; Michael E Cusick; David Valle; Barton Childs; Marc Vidal; Albert-László Barabási
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-14       Impact factor: 11.205

4.  From genotype to phenotype: systems biology meets natural variation.

Authors:  Philip N Benfey; Thomas Mitchell-Olds
Journal:  Science       Date:  2008-04-25       Impact factor: 47.728

5.  A data mining approach for diagnosis of coronary artery disease.

Authors:  Roohallah Alizadehsani; Jafar Habibi; Mohammad Javad Hosseini; Hoda Mashayekhi; Reihane Boghrati; Asma Ghandeharioun; Behdad Bahadorian; Zahra Alizadeh Sani
Journal:  Comput Methods Programs Biomed       Date:  2013-03-25       Impact factor: 5.428

6.  Understanding the heterogeneity of BPD symptoms through latent class analysis: initial results and clinical correlates among inner-city substance users.

Authors:  Marina A Bornovalova; Roy Levy; Kim L Gratz; C W Lejuez
Journal:  Psychol Assess       Date:  2010-06

7.  Suitability of dysphonia measurements for telemonitoring of Parkinson's disease.

Authors:  Max A Little; Patrick E McSharry; Eric J Hunter; Jennifer Spielman; Lorraine O Ramig
Journal:  IEEE Trans Biomed Eng       Date:  2009-04       Impact factor: 4.538

8.  Meta-analysis of the symptom structure of obsessive-compulsive disorder.

Authors:  Michael H Bloch; Angeli Landeros-Weisenberger; Maria C Rosario; Christopher Pittenger; James F Leckman
Journal:  Am J Psychiatry       Date:  2008-10-15       Impact factor: 18.112

9.  Heterogeneity in ADHD: neuropsychological pathways, comorbidity and symptom domains.

Authors:  Cecilia Wåhlstedt; Lisa B Thorell; Gunilla Bohlin
Journal:  J Abnorm Child Psychol       Date:  2009-05

Review 10.  Tumour heterogeneity and cancer cell plasticity.

Authors:  Corbin E Meacham; Sean J Morrison
Journal:  Nature       Date:  2013-09-19       Impact factor: 49.962

View more
  1 in total

1.  DNA Methylation Analysis of Ribosomal DNA in Adults With Down Syndrome.

Authors:  Francesco Ravaioli; Michele Zampieri; Luca Morandi; Chiara Pirazzini; Camilla Pellegrini; Sara De Fanti; Noémie Gensous; Gian Luca Pirazzoli; Luisa Sambati; Alessandro Ghezzo; Fabio Ciccarone; Anna Reale; Daniela Monti; Stefano Salvioli; Paola Caiafa; Miriam Capri; Alexander Bürkle; Maria Moreno-Villanueva; Paolo Garagnani; Claudio Franceschi; Maria Giulia Bacalini
Journal:  Front Genet       Date:  2022-04-27       Impact factor: 4.772

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.