Literature DB >> 30110768

Configuration model for correlation matrices preserving the node strength.

Naoki Masuda1, Sadamori Kojaku1,2, Yukie Sano3.   

Abstract

Correlation matrices are a major type of multivariate data. To examine properties of a given correlation matrix, a common practice is to compare the same quantity between the original correlation matrix and reference correlation matrices, such as those derived from random matrix theory, that partially preserve properties of the original matrix. We propose a model to generate such reference correlation and covariance matrices for the given matrix. Correlation matrices are often analyzed as networks, which are heterogeneous across nodes in terms of the total connectivity to other nodes for each node. Given this background, the present algorithm generates random networks that preserve the expectation of total connectivity of each node to other nodes, akin to configuration models for conventional networks. Our algorithm is derived from the maximum entropy principle. We will apply the proposed algorithm to measurement of clustering coefficients and community detection, both of which require a null model to assess the statistical significance of the obtained results.

Year:  2018        PMID: 30110768     DOI: 10.1103/PhysRevE.98.012312

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  2 in total

1.  Network analysis of the immune state of mice.

Authors:  Elohim Fonseca Dos Reis; Mark Viney; Naoki Masuda
Journal:  Sci Rep       Date:  2021-02-22       Impact factor: 4.379

2.  Spectral estimation for detecting low-dimensional structure in networks using arbitrary null models.

Authors:  Mark D Humphries; Javier A Caballero; Mat Evans; Silvia Maggi; Abhinav Singh
Journal:  PLoS One       Date:  2021-07-02       Impact factor: 3.240

  2 in total

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