Literature DB >> 30107175

Widespread Chromosomal Losses and Mitochondrial DNA Alterations as Genetic Drivers in Hürthle Cell Carcinoma.

Raj K Gopal1, Kirsten Kübler2, Sarah E Calvo3, Paz Polak4, Dimitri Livitz5, Daniel Rosebrock5, Peter M Sadow6, Braidie Campbell7, Samuel E Donovan7, Salma Amin8, Benjamin J Gigliotti9, Zenon Grabarek3, Julian M Hess5, Chip Stewart5, Lior Z Braunstein5, Peter F Arndt5, Scott Mordecai10, Angela R Shih11, Frances Chaves10, Tiannan Zhan12, Carrie C Lubitz13, Jiwoong Kim14, A John Iafrate11, Lori Wirth15, Sareh Parangi16, Ignaty Leshchiner5, Gilbert H Daniels17, Vamsi K Mootha18, Dora Dias-Santagata11, Gad Getz19, David G McFadden20.   

Abstract

Hürthle cell carcinoma of the thyroid (HCC) is a form of thyroid cancer recalcitrant to radioiodine therapy that exhibits an accumulation of mitochondria. We performed whole-exome sequencing on a cohort of primary, recurrent, and metastatic tumors, and identified recurrent mutations in DAXX, TP53, NRAS, NF1, CDKN1A, ARHGAP35, and the TERT promoter. Parallel analysis of mtDNA revealed recurrent homoplasmic mutations in subunits of complex I of the electron transport chain. Analysis of DNA copy-number alterations uncovered widespread loss of chromosomes culminating in near-haploid chromosomal content in a large fraction of HCC, which was maintained during metastatic spread. This work uncovers a distinct molecular origin of HCC compared with other thyroid malignancies.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Hürthle cell; chromosomal losses; complex I; haploid; loss of heterozygosity; metastasis; mitochondria; mtDNA; oncocytic; thyroid cancer

Mesh:

Substances:

Year:  2018        PMID: 30107175      PMCID: PMC6121811          DOI: 10.1016/j.ccell.2018.06.013

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  76 in total

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Authors:  Dan A Landau; Scott L Carter; Petar Stojanov; Aaron McKenna; Kristen Stevenson; Michael S Lawrence; Carrie Sougnez; Chip Stewart; Andrey Sivachenko; Lili Wang; Youzhong Wan; Wandi Zhang; Sachet A Shukla; Alexander Vartanov; Stacey M Fernandes; Gordon Saksena; Kristian Cibulskis; Bethany Tesar; Stacey Gabriel; Nir Hacohen; Matthew Meyerson; Eric S Lander; Donna Neuberg; Jennifer R Brown; Gad Getz; Catherine J Wu
Journal:  Cell       Date:  2013-02-14       Impact factor: 41.582

2.  Near-haploidization significantly associates with oncocytic adrenocortical, thyroid, and parathyroid tumors but not with mitochondrial DNA mutations.

Authors:  Willem E Corver; Tom van Wezel; Kees Molenaar; Melanie Schrumpf; Brendy van den Akker; Ronald van Eijk; Dina Ruano Neto; Jan Oosting; Hans Morreau
Journal:  Genes Chromosomes Cancer       Date:  2014-06-07       Impact factor: 5.006

3.  Specific correlation between the wobble modification deficiency in mutant tRNAs and the clinical features of a human mitochondrial disease.

Authors:  Yohei Kirino; Yu-Ichi Goto; Yolanda Campos; Joaquin Arenas; Tsutomu Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

4.  Prognostic factors of recurrence in encapsulated Hurthle cell carcinoma of the thyroid gland: a clinicopathologic study of 50 cases.

Authors:  Ronald A Ghossein; David H Hiltzik; Diane L Carlson; Snehal Patel; Ashok Shaha; Jatin P Shah; Robert M Tuttle; Bhuvanesh Singh
Journal:  Cancer       Date:  2006-04-15       Impact factor: 6.860

5.  Successful treatment of Hurthle cell thyroid carcinoma with lung and liver metastasis using docetaxel and cisplatin.

Authors:  Hui Zhang; Lei Zeng; Chen Liang; Hui Qiu; Min Zhang; Yan Zhu; Conghua Xie
Journal:  Jpn J Clin Oncol       Date:  2012-09-14       Impact factor: 3.019

6.  Chromosomal aberrations by comparative genomic hybridization in hürthle cell thyroid carcinomas are associated with tumor recurrence.

Authors:  Nobuyuki Wada; Quan-Yang Duh; Daishu Miura; Laurent Brunaud; Mariwil G Wong; Orlo H Clark
Journal:  J Clin Endocrinol Metab       Date:  2002-10       Impact factor: 5.958

7.  Recurrent hemizygous deletions in cancers may optimize proliferative potential.

Authors:  Nicole L Solimini; Qikai Xu; Craig H Mermel; Anthony C Liang; Michael R Schlabach; Ji Luo; Anna E Burrows; Anthony N Anselmo; Andrea L Bredemeyer; Mamie Z Li; Rameen Beroukhim; Matthew Meyerson; Stephen J Elledge
Journal:  Science       Date:  2012-05-24       Impact factor: 47.728

8.  Fidelity of capture-enrichment for mtDNA genome sequencing: influence of NUMTs.

Authors:  Mingkun Li; Roland Schroeder; Albert Ko; Mark Stoneking
Journal:  Nucleic Acids Res       Date:  2012-05-30       Impact factor: 16.971

9.  A high-resolution map of human evolutionary constraint using 29 mammals.

Authors:  Kerstin Lindblad-Toh; Manuel Garber; Or Zuk; Michael F Lin; Brian J Parker; Stefan Washietl; Pouya Kheradpour; Jason Ernst; Gregory Jordan; Evan Mauceli; Lucas D Ward; Craig B Lowe; Alisha K Holloway; Michele Clamp; Sante Gnerre; Jessica Alföldi; Kathryn Beal; Jean Chang; Hiram Clawson; James Cuff; Federica Di Palma; Stephen Fitzgerald; Paul Flicek; Mitchell Guttman; Melissa J Hubisz; David B Jaffe; Irwin Jungreis; W James Kent; Dennis Kostka; Marcia Lara; Andre L Martins; Tim Massingham; Ida Moltke; Brian J Raney; Matthew D Rasmussen; Jim Robinson; Alexander Stark; Albert J Vilella; Jiayu Wen; Xiaohui Xie; Michael C Zody; Jen Baldwin; Toby Bloom; Chee Whye Chin; Dave Heiman; Robert Nicol; Chad Nusbaum; Sarah Young; Jane Wilkinson; Kim C Worley; Christie L Kovar; Donna M Muzny; Richard A Gibbs; Andrew Cree; Huyen H Dihn; Gerald Fowler; Shalili Jhangiani; Vandita Joshi; Sandra Lee; Lora R Lewis; Lynne V Nazareth; Geoffrey Okwuonu; Jireh Santibanez; Wesley C Warren; Elaine R Mardis; George M Weinstock; Richard K Wilson; Kim Delehaunty; David Dooling; Catrina Fronik; Lucinda Fulton; Bob Fulton; Tina Graves; Patrick Minx; Erica Sodergren; Ewan Birney; Elliott H Margulies; Javier Herrero; Eric D Green; David Haussler; Adam Siepel; Nick Goldman; Katherine S Pollard; Jakob S Pedersen; Eric S Lander; Manolis Kellis
Journal:  Nature       Date:  2011-10-12       Impact factor: 49.962

10.  Genome haploidisation with chromosome 7 retention in oncocytic follicular thyroid carcinoma.

Authors:  Willem E Corver; Dina Ruano; Karin Weijers; Wietske C E den Hartog; Merlijn P van Nieuwenhuizen; Noel de Miranda; Ronald van Eijk; Anneke Middeldorp; Ekaterina S Jordanova; Jan Oosting; Ellen Kapiteijn; Guido Hovens; Jan Smit; Tom van Wezel; Hans Morreau
Journal:  PLoS One       Date:  2012-06-01       Impact factor: 3.240

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  53 in total

Review 1.  Evolution of Our Understanding of the Hyperparathyroid Syndromes: A Historical Perspective.

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2.  Afirma Gene Sequencing Classifier Compared with Gene Expression Classifier in Indeterminate Thyroid Nodules.

Authors:  Mayumi Endo; Fadi Nabhan; Kyle Porter; Katie Roll; Lawrence A Shirley; Irina Azaryan; Dena Tonkovich; Jeanette Perlick; Laura E Ryan; Raheela Khawaja; Shumei Meng; John E Phay; Matthew D Ringel; Jennifer A Sipos
Journal:  Thyroid       Date:  2019-07-17       Impact factor: 6.568

Review 3.  Mitochondrion: I am more than a fuel server.

Authors:  Santanu Dasgupta
Journal:  Ann Transl Med       Date:  2019-10

4.  A Compendium of Genetic Modifiers of Mitochondrial Dysfunction Reveals Intra-organelle Buffering.

Authors:  Tsz-Leung To; Alejandro M Cuadros; Hardik Shah; Wendy H W Hung; Yang Li; Sharon H Kim; Daniel H F Rubin; Ryan H Boe; Sneha Rath; John K Eaton; Federica Piccioni; Amy Goodale; Zohra Kalani; John G Doench; David E Root; Stuart L Schreiber; Scott B Vafai; Vamsi K Mootha
Journal:  Cell       Date:  2019-11-14       Impact factor: 41.582

5.  Hürthle cell hurdles: Why do tumors derived from this cell type refuse to reveal their secrets and weaknesses?

Authors:  Peter M Sadow
Journal:  Cancer Cytopathol       Date:  2020-10-12       Impact factor: 5.284

Review 6.  Progression and dormancy in metastatic thyroid cancer: concepts and clinical implications.

Authors:  Neel Rajan; Tilak Khanal; Matthew D Ringel
Journal:  Endocrine       Date:  2020-08-11       Impact factor: 3.633

Review 7.  Molecular Alterations in Thyroid Carcinoma.

Authors:  Mohamed Rizwan Haroon Al Rasheed; Bin Xu
Journal:  Surg Pathol Clin       Date:  2019-09-27

Review 8.  Intratumoral Heterogeneity in Differentiated Thyroid Tumors: An Intriguing Reappraisal in the Era of Personalized Medicine.

Authors:  Antonio Ieni; Roberto Vita; Cristina Pizzimenti; Salvatore Benvenga; Giovanni Tuccari
Journal:  J Pers Med       Date:  2021-04-23

Review 9.  Molecular-Driven Therapy in Advanced Thyroid Cancer.

Authors:  Kevin C Miller; Ashish V Chintakuntlawar
Journal:  Curr Treat Options Oncol       Date:  2021-02-10

Review 10.  The Genomic Landscape of Thyroid Cancer Tumourigenesis and Implications for Immunotherapy.

Authors:  Amandeep Singh; Jeehoon Ham; Joseph William Po; Navin Niles; Tara Roberts; Cheok Soon Lee
Journal:  Cells       Date:  2021-05-01       Impact factor: 6.600

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