Literature DB >> 30093344

Biophysical Modeling of Large-Scale Brain Dynamics and Applications for Computational Psychiatry.

John D Murray1, Murat Demirtaş2, Alan Anticevic2.   

Abstract

Noninvasive neuroimaging has revolutionized the study of the organization of the human brain and how its structure and function are altered in psychiatric disorders. A critical explanatory gap lies in our mechanistic understanding of how systems-level neuroimaging biomarkers emerge from underlying synaptic-level perturbations associated with a disease state. We describe an emerging computational psychiatry approach leveraging biophysically based computational models of large-scale brain dynamics and their potential integration with clinical and pharmacological neuroimaging. In particular, we focus on neural circuit models, which describe how patterns of functional connectivity observed in resting-state functional magnetic resonance imaging emerge from neural dynamics shaped by inter-areal interactions through underlying structural connectivity defining long-range projections. We highlight the importance of local circuit physiological dynamics, in combination with structural connectivity, in shaping the emergent functional connectivity. Furthermore, heterogeneity of local circuit properties across brain areas, which impacts large-scale dynamics, may be critical for modeling whole-brain phenomena and alterations in psychiatric disorders and pharmacological manipulation. Finally, we discuss important directions for future model development and biophysical extensions, which will expand their utility to link clinical neuroimaging to neurobiological mechanisms.
Copyright © 2018 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Computational model; Functional connectivity; Neuroimaging; Resting-state; Schizophrenia; Transcriptomics

Mesh:

Year:  2018        PMID: 30093344      PMCID: PMC6537601          DOI: 10.1016/j.bpsc.2018.07.004

Source DB:  PubMed          Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging        ISSN: 2451-9022


  128 in total

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3.  Ongoing cortical activity at rest: criticality, multistability, and ghost attractors.

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Journal:  J Neurosci       Date:  2012-03-07       Impact factor: 6.167

4.  Quantitative architecture distinguishes prefrontal cortical systems in the rhesus monkey.

Authors:  S M Dombrowski; C C Hilgetag; H Barbas
Journal:  Cereb Cortex       Date:  2001-10       Impact factor: 5.357

5.  Functional connectivity and brain networks in schizophrenia.

Authors:  Mary-Ellen Lynall; Danielle S Bassett; Robert Kerwin; Peter J McKenna; Manfred Kitzbichler; Ulrich Muller; Ed Bullmore
Journal:  J Neurosci       Date:  2010-07-14       Impact factor: 6.167

Review 6.  Are Hallucinations Due to an Imbalance Between Excitatory and Inhibitory Influences on the Brain?

Authors:  Renaud Jardri; Kenneth Hugdahl; Matthew Hughes; Jérôme Brunelin; Flavie Waters; Ben Alderson-Day; Dave Smailes; Philipp Sterzer; Philip R Corlett; Pantelis Leptourgos; Martin Debbané; Arnaud Cachia; Sophie Denève
Journal:  Schizophr Bull       Date:  2016-06-03       Impact factor: 9.306

7.  Alpha and gamma oscillations characterize feedback and feedforward processing in monkey visual cortex.

Authors:  Timo van Kerkoerle; Matthew W Self; Bruno Dagnino; Marie-Alice Gariel-Mathis; Jasper Poort; Chris van der Togt; Pieter R Roelfsema
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-09       Impact factor: 11.205

8.  A hierarchy of intrinsic timescales across primate cortex.

Authors:  John D Murray; Alberto Bernacchia; David J Freedman; Ranulfo Romo; Jonathan D Wallis; Xinying Cai; Camillo Padoa-Schioppa; Tatiana Pasternak; Hyojung Seo; Daeyeol Lee; Xiao-Jing Wang
Journal:  Nat Neurosci       Date:  2014-11-10       Impact factor: 24.884

9.  Noise during rest enables the exploration of the brain's dynamic repertoire.

Authors:  Anandamohan Ghosh; Y Rho; A R McIntosh; R Kötter; V K Jirsa
Journal:  PLoS Comput Biol       Date:  2008-10-10       Impact factor: 4.475

10.  Hierarchy of transcriptomic specialization across human cortex captured by structural neuroimaging topography.

Authors:  Joshua B Burt; Murat Demirtaş; William J Eckner; Natasha M Navejar; Jie Lisa Ji; William J Martin; Alberto Bernacchia; Alan Anticevic; John D Murray
Journal:  Nat Neurosci       Date:  2018-08-06       Impact factor: 24.884

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  8 in total

1.  Hierarchical Heterogeneity across Human Cortex Shapes Large-Scale Neural Dynamics.

Authors:  Murat Demirtaş; Joshua B Burt; Markus Helmer; Jie Lisa Ji; Brendan D Adkinson; Matthew F Glasser; David C Van Essen; Stamatios N Sotiropoulos; Alan Anticevic; John D Murray
Journal:  Neuron       Date:  2019-02-07       Impact factor: 17.173

2.  Whole-Brain Modelling: Past, Present, and Future.

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Review 3.  Pushing the Boundaries of Psychiatric Neuroimaging to Ground Diagnosis in Biology.

Authors:  Manish Saggar; Lucina Q Uddin
Journal:  eNeuro       Date:  2019-11-15

4.  Topographic Mapping as a Basic Principle of Functional Organization for Visual and Prefrontal Functional Connectivity.

Authors:  Jonathan F O'Rawe; Hoi-Chung Leung
Journal:  eNeuro       Date:  2020-02-12

5.  Transcriptomics-informed large-scale cortical model captures topography of pharmacological neuroimaging effects of LSD.

Authors:  Joshua B Burt; Katrin H Preller; Murat Demirtas; Jie Lisa Ji; John H Krystal; Franz X Vollenweider; Alan Anticevic; John D Murray
Journal:  Elife       Date:  2021-07-27       Impact factor: 8.140

6.  Making Sense of Computational Psychiatry.

Authors:  Lilianne R Mujica-Parodi; Helmut H Strey
Journal:  Int J Neuropsychopharmacol       Date:  2020-05-27       Impact factor: 5.176

7.  Quantitative Systems Pharmacology for Neuroscience Drug Discovery and Development: Current Status, Opportunities, and Challenges.

Authors:  Hugo Geerts; John Wikswo; Piet H van der Graaf; Jane P F Bai; Chris Gaiteri; David Bennett; Susanne E Swalley; Edgar Schuck; Rima Kaddurah-Daouk; Katya Tsaioun; Mary Pelleymounter
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2019-11-24

Review 8.  Whole-Brain Models to Explore Altered States of Consciousness from the Bottom Up.

Authors:  Rodrigo Cofré; Rubén Herzog; Pedro A M Mediano; Juan Piccinini; Fernando E Rosas; Yonatan Sanz Perl; Enzo Tagliazucchi
Journal:  Brain Sci       Date:  2020-09-10
  8 in total

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