Literature DB >> 30088438

Comprehensive Ara-C SNP score predicts leukemic cell intracellular ara-CTP levels in pediatric acute myeloid leukemia patients.

Abdelrahman H Elsayed1, Xueyuan Cao2,3, Kristine R Crews4, Varsha Gandhi5, William Plunkett5, Jeffrey E Rubnitz6, Raul C Ribeiro6, Stanley B Pounds2, Jatinder K Lamba1.   

Abstract

AIM: Cytarabine (Ara-C), a mainstay of acute myeloid leukemia (AML) treatment, is a prodrug requiring activation to ara-CTP for its antileukemic activity. Aim of this study was to evaluate impact of genetic variants in the key genes involved in ara-C metabolism on the leukemic cell intracellular levels of ara-CTP.
METHOD: We investigated SNPs in 14 ara-C metabolic-pathway genes, for association with intracellular ara-CTP levels, in leukemic cells obtained post-initiation of cytarabine infusion in pediatric AML patients (n = 68).
RESULTS: Nine SNPs were significantly associated with leukemic cell intracellular concentration of ara-CTP. A comprehensive ara-CTP-SNP-score (ACSS) was further developed from top four SNPs identified in regression model. Patients were classified into three groups based on ACSS: high-ACSS (score >0), intermediate-ACSS (score = 0) and low-ACSS (score <0). ACSS designation was significant predictor of intracellular ara-CTP levels (p = 0.00012), suggesting a cumulative or synergistic effect of the significant SNPs.
CONCLUSION: ACSS score designation holds promise in definfing ara-C dose. Validation of the clinical utility of ACSS score in other independent cohorts will help identification of patients with potentially lower or higher levels of the ara-CTP in leukemic cells, thereby opening up opportunities for dose management to reduce toxicity and enhance efficacy.

Entities:  

Keywords:  SNPs; cytarabine; pharmacogenomics;  acute myeloid leukemia

Mesh:

Substances:

Year:  2018        PMID: 30088438      PMCID: PMC6219441          DOI: 10.2217/pgs-2018-0086

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  30 in total

1.  Pharmacogenomics of cytarabine in childhood leukemia.

Authors:  Jatinder K Lamba
Journal:  Pharmacogenomics       Date:  2011-12       Impact factor: 2.533

2.  Effect of genetic alterations of cytarabine- metabolizing enzymes in childhood acute lymphoblastic leukemia.

Authors:  Chumphorn Banklau; Sumalee Jindadamrongwech; Ruchchadol Sawangpanich; Suntaree Apibal; Suradej Hongeng; Karan Paisooksantivatana; Samart Pakakasama
Journal:  Hematol Oncol Stem Cell Ther       Date:  2010

3.  Cytidine deaminase polymorphisms and worse treatment response in normal karyotype AML.

Authors:  Lyoung Hyo Kim; Hyun Sub Cheong; Youngil Koh; Kwang-Sung Ahn; Chansu Lee; Hyung-Lae Kim; Hyoung Doo Shin; Sung-Soo Yoon
Journal:  J Hum Genet       Date:  2015-09-10       Impact factor: 3.172

4.  Genetic variants in cytosolic 5'-nucleotidase II are associated with its expression and cytarabine sensitivity in HapMap cell lines and in patients with acute myeloid leukemia.

Authors:  Amit K Mitra; Kristine R Crews; Stanley Pounds; Xueyuan Cao; Tanya Feldberg; Yogita Ghodke; Varsha Gandhi; William Plunkett; M Eileen Dolan; Christine Hartford; Susana Raimondi; Dario Campana; James Downing; Jeffrey E Rubnitz; Raul C Ribeiro; Jatinder K Lamba
Journal:  J Pharmacol Exp Ther       Date:  2011-06-28       Impact factor: 4.030

Review 5.  [Acute myeloid Leukemia].

Authors:  Jan Braess
Journal:  Dtsch Med Wochenschr       Date:  2016-11-11       Impact factor: 0.628

6.  Cyclopentenyl cytosine induces apoptosis and increases cytarabine-induced apoptosis in a T-lymphoblastic leukemic cell-line.

Authors:  A C Verschuur; J Brinkman; A H Van Gennip; R Leen; R J Vet; L M Evers; P A Voûte; A B Van Kuilenburg
Journal:  Leuk Res       Date:  2001-10       Impact factor: 3.156

Review 7.  Acute Myeloid Leukemia: Past, Present, and Prospects for the Future.

Authors:  Nicholas J Short; Farhad Ravandi
Journal:  Clin Lymphoma Myeloma Leuk       Date:  2016-08

8.  Association of polymorphisms of cytosine arabinoside-metabolizing enzyme gene with therapeutic efficacy for acute myeloid leukemia.

Authors:  Pei-Pei Xu; Bao-An Chen; Ji-Feng Feng; Lu Cheng; Guo-Hua Xia; Yu-Feng Li; Jun Qian; Jia-Hua Ding; Zu-Hong Lu; Xue-Mei Wang; Ke Xu; Margaret Schultz
Journal:  Chin Med J (Engl)       Date:  2012-06       Impact factor: 2.628

9.  SNP analyses in cytarabine metabolizing enzymes in AML patients and their impact on treatment response and patient survival: identification of CDA SNP C-451T as an independent prognostic parameter for survival.

Authors:  U Mahlknecht; C-L Dransfeld; N Bulut; M Kramer; C Thiede; G Ehninger; M Schaich
Journal:  Leukemia       Date:  2009-05-21       Impact factor: 11.528

10.  Decreased survival in normal karyotype AML with single-nucleotide polymorphisms in genes encoding the AraC metabolizing enzymes cytidine deaminase and 5'-nucleotidase.

Authors:  Ingrid Jakobsen Falk; Anna Fyrberg; Esbjörn Paul; Hareth Nahi; Monica Hermanson; Richard Rosenquist; Martin Höglund; Lars Palmqvist; Dick Stockelberg; Yuan Wei; Henrik Gréen; Kourosh Lotfi
Journal:  Am J Hematol       Date:  2013-09-09       Impact factor: 10.047

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  2 in total

1.  Polygenic Ara-C Response Score Identifies Pediatric Patients With Acute Myeloid Leukemia in Need of Chemotherapy Augmentation.

Authors:  Abdelrahman H Elsayed; Xueyuan Cao; Amit K Mitra; Huiyun Wu; Susana Raimondi; Christopher Cogle; Zeina Al-Mansour; Raul C Ribeiro; Alan Gamis; Edward Anders Kolb; Richard Aplenc; Todd A Alonzo; Soheil Meshinchi; Jeffrey Rubnitz; Stanley Pounds; Jatinder K Lamba
Journal:  J Clin Oncol       Date:  2022-01-06       Impact factor: 50.717

2.  A personalized approach to acute myeloid leukemia therapy: current options.

Authors:  Raveen Stephen Stallon Illangeswaran; Saswati Das; Daniel Zechariah Paul; Vikram Mathews; Poonkuzhali Balasubramanian
Journal:  Pharmgenomics Pers Med       Date:  2019-08-02
  2 in total

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