Literature DB >> 30079490

Mutations in WDR4 as a new cause of Galloway-Mowat syndrome.

Daniela A Braun1, Shirlee Shril1, Aditi Sinha2, Ronen Schneider1, Weizhen Tan1, Shazia Ashraf1, Tobias Hermle1, Tilman Jobst-Schwan1, Eugen Widmeier1, Amar J Majmundar1, Ankana Daga1, Jillian K Warejko1, Makiko Nakayama1, David Schapiro1, Jing Chen1, Merlin Airik1, Jia Rao1, Johanna Magdalena Schmidt1, Charlotte A Hoogstraten1, Hannah Hugo1, Jitendra Meena2, Monkol Lek3, Kristen M Laricchia3, Arvind Bagga2, Friedhelm Hildebrandt1.   

Abstract

Galloway-Mowat syndrome (GAMOS) is a phenotypically heterogeneous disorder characterized by neurodevelopmental defects combined with renal-glomerular disease, manifesting with proteinuria. To identify additional monogenic disease causes, we here performed whole exome sequencing (WES), linkage analysis, and homozygosity mapping in three affected siblings of an Indian family with GAMOS. Applying established criteria for variant filtering, we identify a novel homozygous splice site mutation in the gene WDR4 as the likely disease-causing mutation in this family. In line with previous reports, we observe growth deficiency, microcephaly, developmental delay, and intellectual disability as phenotypic features resulting from WDR4 mutations. However, the newly identified allele additionally gives rise to proteinuria and nephrotic syndrome, a phenotype that was never reported in patients with WDR4 mutations. Our data thus expand the phenotypic spectrum of WDR4 mutations by demonstrating that, depending on the specific mutated allele, a renal phenotype may be present. This finding suggests that GAMOS may occupy a phenotypic spectrum with other microcephalic diseases. Furthermore, WDR4 is an additional example of a gene that encodes a tRNA modifying enzyme and gives rise to GAMOS, if mutated. Our findings thereby support the recent observation that, like neurons, podocytes of the renal glomerulus are particularly vulnerable to cellular defects resulting from altered tRNA modifications.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  Galloway-Mowat syndrome; Mendelian diseases; rare syndromic diseases; variable phenotypic expressivity; whole-exome sequencing

Mesh:

Substances:

Year:  2018        PMID: 30079490      PMCID: PMC6289609          DOI: 10.1002/ajmg.a.40489

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.802


  30 in total

1.  Further delineation of the phenotype caused by biallelic variants in the WDR4 gene.

Authors:  A Trimouille; E Lasseaux; P Barat; C Deiller; S Drunat; C Rooryck; B Arveiler; D Lacombe
Journal:  Clin Genet       Date:  2017-09-29       Impact factor: 4.438

2.  Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA.

Authors:  Andrei Alexandrov; Mark R Martzen; Eric M Phizicky
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

3.  MutationTaster2: mutation prediction for the deep-sequencing age.

Authors:  Jana Marie Schwarz; David N Cooper; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2014-04       Impact factor: 28.547

4.  Congenital microcephaly with hiatus hernia and nephrotic syndrome in two sibs.

Authors:  W H Galloway; A P Mowat
Journal:  J Med Genet       Date:  1968-12       Impact factor: 6.318

5.  Nephrotic syndrome, microcephaly, and developmental delay: three separate syndromes.

Authors:  K E Meyers; P Kaplan; B S Kaplan
Journal:  Am J Med Genet       Date:  1999-01-29

6.  WDR73 Mutations Cause Infantile Neurodegeneration and Variable Glomerular Kidney Disease.

Authors:  Julia Vodopiutz; Rainer Seidl; Daniela Prayer; M Imran Khan; Johannes A Mayr; Berthold Streubel; Jens-Oliver Steiß; Andreas Hahn; Dagmar Csaicsich; Christel Castro; Mirna Assoum; Thomas Müller; Dagmar Wieczorek; Grazia M S Mancini; Carolin E Sadowski; Nicolas Lévy; André Mégarbané; Koumudi Godbole; Denny Schanze; Friedhelm Hildebrandt; Valérie Delague; Andreas R Janecke; Martin Zenker
Journal:  Hum Mutat       Date:  2015-08-06       Impact factor: 4.878

7.  Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine.

Authors:  Daniel Y L Mao; Dante Neculai; Michael Downey; Stephen Orlicky; Yosr Z Haffani; Derek F Ceccarelli; Jenny S L Ho; Rachel K Szilard; Wei Zhang; Cynthia S Ho; Leo Wan; Christophe Fares; Sigrun Rumpel; Igor Kurinov; Cheryl H Arrowsmith; Daniel Durocher; Frank Sicheri
Journal:  Mol Cell       Date:  2008-10-24       Impact factor: 17.970

8.  Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals.

Authors:  Gene Yeo; Christopher B Burge
Journal:  J Comput Biol       Date:  2004       Impact factor: 1.479

9.  HomozygosityMapper--an interactive approach to homozygosity mapping.

Authors:  Dominik Seelow; Markus Schuelke; Friedhelm Hildebrandt; Peter Nürnberg
Journal:  Nucleic Acids Res       Date:  2009-05-21       Impact factor: 16.971

10.  Functional assignment of KEOPS/EKC complex subunits in the biosynthesis of the universal t6A tRNA modification.

Authors:  Ludovic Perrochia; Dorian Guetta; Arnaud Hecker; Patrick Forterre; Tamara Basta
Journal:  Nucleic Acids Res       Date:  2013-08-14       Impact factor: 16.971

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  16 in total

Review 1.  tRNA dysregulation and disease.

Authors:  Esteban A Orellana; Elisabeth Siegal; Richard I Gregory
Journal:  Nat Rev Genet       Date:  2022-06-09       Impact factor: 59.581

2.  Genomic, Proteomic, and Phenotypic Spectrum of Novel O-Sialoglycoprotein Endopeptidase Variant in Four Affected Individuals With Galloway-Mowat Syndrome.

Authors:  Malak Ali Alghamdi; Hicham Benabdelkamel; Afshan Masood; Narjes Saheb Sharif-Askari; Mahmood Y Hachim; Hamad Alsheikh; Muddathir H Hamad; Mustafa A Salih; Fahad A Bashiri; Khalid Alhasan; Tarek Kashour; Pilar Guatibonza Moreno; Sabine Schröder; Vasiliki Karageorgou; Aida M Bertoli-Avella; Hisham Alkhalidi; Dima Z Jamjoom; Ibrahim A Alorainy; Assim A Alfadda; Rabih Halwani
Journal:  Front Genet       Date:  2022-06-23       Impact factor: 4.772

3.  Galloway-Mowat Syndrome Type 3 Caused by OSGEP Gene Variants: A Case Report and Literature Review.

Authors:  Suhua Xu; Lan Hu; Lin Yang; Bingbing Wu; Yun Cao; Rong Zhang; Xin Xu; Haiyan Ma; Wenhao Zhou; Guoqiang Cheng; Peng Zhang; Liyuan Hu
Journal:  Front Pediatr       Date:  2022-06-17       Impact factor: 3.569

4.  Mutations in PRDM15 Are a Novel Cause of Galloway-Mowat Syndrome.

Authors:  Nina Mann; Slim Mzoughi; Ronen Schneider; Susanne J Kühl; Denny Schanze; Verena Klämbt; Svjetlana Lovric; Youying Mao; Shasha Shi; Weizhen Tan; Michael Kühl; Ana C Onuchic-Whitford; Ernestine Treimer; Thomas M Kitzler; Franziska Kause; Sven Schumann; Makiko Nakayama; Florian Buerger; Shirlee Shril; Amelie T van der Ven; Amar J Majmundar; Kristina Marie Holton; Amy Kolb; Daniela A Braun; Jia Rao; Tilman Jobst-Schwan; Eva Mildenberger; Thomas Lennert; Alma Kuechler; Dagmar Wieczorek; Oliver Gross; Beate Ermisch-Omran; Anja Werberger; Martin Skalej; Andreas R Janecke; Neveen A Soliman; Shrikant M Mane; Richard P Lifton; Jan Kadlec; Ernesto Guccione; Michael J Schmeisser; Martin Zenker; Friedhelm Hildebrandt
Journal:  J Am Soc Nephrol       Date:  2021-02-16       Impact factor: 10.121

5.  Matching tRNA modifications in humans to their known and predicted enzymes.

Authors:  Valérie de Crécy-Lagard; Pietro Boccaletto; Carl G Mangleburg; Puneet Sharma; Todd M Lowe; Sebastian A Leidel; Janusz M Bujnicki
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

6.  Defects in t6A tRNA modification due to GON7 and YRDC mutations lead to Galloway-Mowat syndrome.

Authors:  Christelle Arrondel; Sophia Missoury; Rozemarijn Snoek; Julie Patat; Giulia Menara; Bruno Collinet; Dominique Liger; Dominique Durand; Olivier Gribouval; Olivia Boyer; Laurine Buscara; Gaëlle Martin; Eduardo Machuca; Fabien Nevo; Ewen Lescop; Daniela A Braun; Anne-Claire Boschat; Sylvia Sanquer; Ida Chiara Guerrera; Patrick Revy; Mélanie Parisot; Cécile Masson; Nathalie Boddaert; Marina Charbit; Stéphane Decramer; Robert Novo; Marie-Alice Macher; Bruno Ranchin; Justine Bacchetta; Audrey Laurent; Sophie Collardeau-Frachon; Albertien M van Eerde; Friedhelm Hildebrandt; Daniella Magen; Corinne Antignac; Herman van Tilbeurgh; Géraldine Mollet
Journal:  Nat Commun       Date:  2019-09-03       Impact factor: 14.919

7.  METTL1/WDR4-mediated m7G tRNA modifications and m7G codon usage promote mRNA translation and lung cancer progression.

Authors:  Jieyi Ma; Hui Han; Ying Huang; Chunlong Yang; Siyi Zheng; Tiancai Cai; Jiong Bi; Xiaohui Huang; Ruiming Liu; Libin Huang; Yifeng Luo; Wen Li; Shuibin Lin
Journal:  Mol Ther       Date:  2021-08-08       Impact factor: 11.454

8.  Genetic aspects of congenital nephrotic syndrome: a consensus statement from the ERKNet-ESPN inherited glomerulopathy working group.

Authors:  Beata Stefania Lipska-Ziętkiewicz; Fatih Ozaltin; Tuula Hölttä; Detlef Bockenhauer; Sandra Bérody; Elena Levtchenko; Marina Vivarelli; Hazel Webb; Dieter Haffner; Franz Schaefer; Olivia Boyer
Journal:  Eur J Hum Genet       Date:  2020-05-28       Impact factor: 4.246

Review 9.  WD40-Repeat Proteins in Ciliopathies and Congenital Disorders of Endocrine System.

Authors:  Yeonjoo Kim; Soo-Hyun Kim
Journal:  Endocrinol Metab (Seoul)       Date:  2020-09-08

10.  Disruption of pathways regulated by Integrator complex in Galloway-Mowat syndrome due to WDR73 mutations.

Authors:  F C Tilley; C Arrondel; C Chhuon; M Boisson; N Cagnard; M Parisot; G Menara; N Lefort; I C Guerrera; C Bole-Feysot; A Benmerah; C Antignac; G Mollet
Journal:  Sci Rep       Date:  2021-03-08       Impact factor: 4.379

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