| Literature DB >> 30079185 |
Rajesh Mannancherry1, Michel Rickhaus1, Daniel Häussinger1, Alessandro Prescimone1, Marcel Mayor1,2,3.
Abstract
Herein, the syntheses of two tightly packed all-carbon "Geländer" molecules with axial chirality are described. Motivated by our previous results, we further reduced the bridge length by excluding the heteroatoms. The absolute configuration was determined by comparison of the measured and calculated circular dichroism (CD) spectra and the thermodynamic stability was determined by dynamic high-performance liquid chromatography (HPLC) and CD analysis. The cyclophanes were fully characterized by CD measurements, X-ray diffraction (XRD) analysis, NMR, UV-Vis and high resolution mass spectrometry (HRMS). Our novel all-carbon macrocycle is the most stable Geländer system reported so far.Entities:
Year: 2018 PMID: 30079185 PMCID: PMC6050599 DOI: 10.1039/c8sc01707g
Source DB: PubMed Journal: Chem Sci ISSN: 2041-6520 Impact factor: 9.825
Fig. 1(a) Concept of a helical staircase with a banister (orange). (b) Vögtle's first terphenylene Geländer oligomer design.1,2 (c) Schematic illustration of the achieved Geländer molecules 3–7 with different heteroatoms in the bridging unit.7,9 (d) Schematic illustration of the all-carbon Geländer macrocycle 1 and 2. The circled numbers correspond to the number of atoms in each macrocycle.
Scheme 1Synthesis of precursor 14: (a) NBS, DMF, –15 °C, 1 h, 93%. (b) A, Pd(PPh3)2Cl2, K2CO3, 1,4-dioxane/MeOH (4 : 1), 60 °C, 1–2 h, 81%. (c) B2pin2, BPO, t-BuONO, MeCN, 81 °C, 1–2 h. (d) B, Pd(PPh3)2Cl2, K2CO3, 1,4-dioxane/MeOH (4 : 1), 60 °C, 7 h, 31% over 2 steps. (e) Sphos Pd G2, K2CO3, Tol/H2O (4 : 1), 110 °C, 4 d, 69%. (f) DIBAL-H, DCM, RT, 10 min, 93%. (g) PBr3, DCM, RT, 30 min, 74%. Bpin = 4,4,5,5-tetramethyl-1,3,2-dioxaborolane, BPO = benzoyl peroxide, SPhos Pd G2 = chloro(2-dicyclohexylphosphino-2′,6′-dimethoxy-1,1′-biphenyl)[2-(2′-amino-1,1′-biphenyl)]palladium(ii).
Scheme 2Synthesis of the two structural isomers and by twofold macro-cyclization: (a) PhLi, THF, 0 °C to RT, 2–3 h, 26% for the mixture and . The red and blue arrows point at the benzylic bromides engaged in the coupling reaction resulting in and respectively. The numbers in the square boxes denominate the carbon atoms in each macrocycle.
Fig. 2(a–c) Schematic representations of the P enantiomers 1a (blue and purple) and 2a (red). The red dot and dash lines represent the main axis. The X-ray structure of enantiomer 1a (blue and purple) and 2a (red) are displayed from different viewpoints. With (d)–(f) side- and (g)–(i) top-views of the structures with respect to their main axis. While (d) and (g) display the zig–zag arrangement of the longer oligomer, (e) and (h) display the helical arrangement of the purple quinquephenyl with respect to the xylene axis in 1a. Color code: bridge = blue, purple or red, backbone = gray, hydrogen atoms = white.
Fig. 3The UV/Vis (dashed lines) and CD plots (solid coloured line) for Geländer system (a) 1a,b and (b) 2a,b in 99 : 1 n-hexane : i-PrOH at 10 °C. The experimental and calculated CD spectra of (c) 1a and (d) 2a by using TD-B3LYP/6-31G** functional with 75 triplet and 75 singlet excitations; total: 150 states; width 0.4 eV. The calculated spectra are based on the data from the single-crystal structures. Colored: experimental spectra, black dots: calculated spectra, grey bars: calculated transitions. Decay of the CD signals for (e) 1b and (g) 2a together with their linear fit obtained by plotting the ln of the signal against time for (f) 1b and (h) 2a. The slope of the linear fit provides the rate constant krac, which gives access to the Gibbs free energy of the racemization process ΔG≠rac at 25 °C (see ESI†).
Measured rate constants, half-lives, Gibbs free energies, enthalpies and entropies of compound 1 and 2 at 25 °C
| Compound | Ratio of macrocycles | Analytical method |
|
| Δ | Δ | Δ |
|
| [12 : 12] | Dynamic CD | 2.1 × 10–6 | 91.98 | 103.7 | — | — |
| Chiral HPLC | 2.2 × 10–6 | 85.88 | 103.6 | 101.7 | –6.6 | ||
|
| [11 : 13] | Dynamic CD | 6.2 × 10–5 | 3.09 | 95.2 | — | — |
| Chiral HPLC | 4.9 × 10–5 | 3.89 | 95.9 | 66.2 | –99.8 |