| Literature DB >> 30078954 |
P K Rout1, O Matika2, R Kaushik1, M S Dige1, G Dass1, M K Singh1, S Bhusan1,2.
Abstract
Goats are adaptable to varied farming environments and contribute significantly towards sustainable livestock production and food security. Selective breeding of goats for improved performance is an important component of sustainable production. The objectives of the present study were to determine the most appropriate models of analysis for growth traits, to estimate genetic parameters, survival potential of kids from birth to 12 months of age and to estimate genetic trends for growth traits of Jamunapari kids at different ages. Genetic parameter estimates were obtained from 6590 records generated between 1982 and 2012 from 5922 animals with a pedigree covering over 13 generations. The most parsimonious model for early growth traits included permanent environmental effects due to the dam (PE) and litter effects. Similarly, the most appropriate model for early average daily gain (ADG) between birth and 3 or 6 months also included PE and litter effects. The estimates of heritability for survival from birth to 12 months of age ranged from 0.10 to 0.43. The estimates of heritability for ADG varied from 0.04 to 0.41. In general, higher estimates of heritability were observed when a sire model was fitted in the random effect. There was no genetic variation observed for survival between birth and 3 months of age. However, heritability estimates of between 0.18 and 0.39 were observed for survivability during post-weaning period to 12 months of age. The genetic trend at 9 months of age and 12 months of age was 0.144 kg 0.189 kg per year respectively. The genetic trend at all the ages was positive during the study period.Entities:
Keywords: Average daily gain; Body growth; Genetic trend; Jamunapari goats
Year: 2018 PMID: 30078954 PMCID: PMC6054051 DOI: 10.1016/j.smallrumres.2018.04.002
Source DB: PubMed Journal: Small Rumin Res ISSN: 0921-4488 Impact factor: 1.611
Summary of pedigree data structures and number of records.
| Source | Numbers |
|---|---|
| Phenotype records | 6590 |
| Pedigree records | 5922 |
| Sires | 292 |
| Sire of sires | 125 |
| Dam of sires | 196 |
| Dams | 1819 |
| Sire of dams | 207 |
| Dam of dams | 784 |
| Generations | 13 |
Summary statistics for growth traits of Jamunapari goats.
| BWT | M3WT | M6WT | M9WT | M12WT | |
|---|---|---|---|---|---|
| Number of Records | 5922 | 5359 | 4758 | 4223 | 3756 |
| Mean (kg) | 3.1 | 10.3 | 14.5 | 19.4 | 23.9 |
| Standard Deviation | 0.67 | 2.42 | 3.53 | 4.92 | 6.03 |
| Standard error | 0.01 | 0.03 | 0.05 | 0.08 | 0.10 |
| Coefficient of Variation | 21.3 | 23.5 | 24.5 | 25.4 | 25.2 |
| Range (Minimum-Maximum) Kg | 0.8–5.6 | 3.0–21.0 | 4.0–28.6 | 6.0–41.0 | 8.5–48.2 |
Where BWT ∼ birth weight; M3WT∼ 3 months weight; M6WT∼ 6 months weight; M9WT∼ 9 months weight; M12WT∼ 9 months weight
Genetic parameter estimates for growth traits between birth and 12 month of age fitting an animal or sire model accounting for permanent environmental effects due to dam (pe) and litter effects (lit).
| Trait | BWT | M3WT | M6WT | M9WT | M12WT | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Model | Animal | Sire | Animal | Sire | Animal | Sire | Animal | Sire | Animal | Sire |
| σ2a | 0.046 | 0.651 | – | 1.613 | – | 1.652 | – | 1.854 | – | |
| σ2sire | – | 0.009 | – | 0.455 | – | 0.799 | – | 0.375 | – | 0.200 |
| σ2pe | 0.034 | 0.046 | 0.397 | 0.554 | 0.625 | 0.995 | 0.573 | 1.080 | 0.577 | 1.159 |
| σ2lit | 0.125 | 0.156 | 1.160 | 1.117 | 1.124 | 1.007 | 2.022 | 1.915 | 2.821 | 2.682 |
| σ2res | 0.119 | 0.142 | 1.815 | 2.072 | 4.991 | 5.764 | 9.085 | 9.940 | 12.204 | 13.093 |
| σ2pheno | 0.324 | 0.323 | 4.023 | 4.198 | 8.354 | 8.565 | 13.332 | 13.311 | 17.456 | 17.512 |
| s.e. | 0.007 | 0.69 | 0.09 | 0.110 | 0.193 | 0.222 | 0.311 | 0.307 | 0.425 | 0.430 |
| h2 | 0.14 | 0.11 | 0.16 | 0.43 | 0.19 | 0.37 | 0.12 | 0.11 | 0.11 | 0.13 |
| s.e. | 0.03 | 0.03 | 0.03 | 0.07 | 0.03 | 0.07 | 0.03 | 0.04 | 0.03 | 0.04 |
| pe2 | 0.11 | 0.14 | 0.10 | 0.13 | 0.07 | 0.12 | 0.04 | 0.08 | 0.03 | 0.07 |
| s.e. | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 |
| lit2 | 0.39 | 0.39 | 0.29 | 0.27 | 0.13 | 0.12 | 0.15 | 0.14 | 0.16 | 0.15 |
| s.e. | 0.02 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 |
Where σ2a ∼ direct additive variance; σ2sire ∼ Sire variance; σ2pe ∼ variance of permanent environment due to the dam; σ2lit ∼variance due to Litter effects; σ2res ∼residual variance; σ2pheno∼ total phenotypic variance; s.e. ∼ standard error; BWT ∼ birth weight; M3WT∼ 3 months weight; M6WT∼ 6 months weight; M9WT∼ 9 months weight; M12WT∼ 12 months weight.
Genetic parameter of average daily gain on growth traits fitting animal model, permanent environmental effects due to the dam (pe) and litter effects (lit).
| ADG | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Months (M) | Birth – 3M | 3–6M | 3–9M | 3–12M | Birth – 6M | 6–9M | Birth – 9M | 9–12M | Birth – 12 M |
| model | pe_lit | pe_lit | lit | lit | pe_lit | lit | pe_lit | lit | pe_lit |
| σ2a | 0.0079 | 0.0072 | 0.0023 | 0.0017 | 0.0047 | 0.0020 | 0.0022 | 0.0025 | 0.0014 |
| σ2pe | 0.0030 | 0.0003 | – | – | 0.0013 | – | 0.0005 | – | 0.0003 |
| σ2lit | 0.0130 | 0.0083 | 0.0044 | 0.0024 | 0.0031 | 0.0097 | 0.0025 | 0.0094 | 0.0019 |
| σ2res | 0.0204 | 0.0328 | 0.0199 | 0.0136 | 0.0147 | 0.0437 | 0.0119 | 0.0363 | 0.0090 |
| σ2pheno | 0.0444 | 0.0485 | 0.0266 | 0.0177 | 0.0239 | 0.0555 | 0.0171 | 0.0481 | 0.0125 |
| s.e. | 0.0010 | 0.0011 | 0.0006 | 0.0004 | 0.0006 | 0.0012 | 0.0004 | 0.0011 | 0.0003 |
| h2 | 0.18 | 0.15 | 0.09 | 0.10 | 0.20 | 0.04 | 0.13 | 0.05 | 0.11 |
| s.e. | 0.03 | 0.03 | 0.02 | 0.02 | 0.03 | 0.02 | 0.03 | 0.02 | 0.03 |
| pe2 | 0.07 | 0.01 | – | – | 0.06 | – | 0.03 | – | 0.02 |
| s.e. | 0.02 | 0.02 | – | – | 0.02 | – | 0.02 | – | 0.02 |
| lit2 | 0.29 | 0.17 | 0.16 | 0.14 | 0.13 | 0.18 | 0.15 | 0.19 | 0.15 |
| s.e. | 0.02 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 |
Where σ2a ∼ direct additive variance, σ2pe ∼ variance of permanent environment due to the dam; σ2lit ∼variance due to Litter effects, σ2res ∼residual variance, σ2pheno∼ total phenotypic variance, s.e. ∼ standard error.
Genetic parameter of average daily gain (ADG) on growth traits fitting sire model, permanent environmental effects due to the dam (PE) and litter effects (LIT).
| ADG | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Months(M) | Birth – 3M | 3–6M | 3–9M | 3–12M | Birth – 6M | 6–9M | Birth – 9M | 9–12M | Birth –12M |
| model | pe_lit | pe_lit | lit | lit | pe_lit | lit | pe_lit | lit | pe_lit |
| σ2sire | 0.0055 | 0.0046 | 0.0009 | 0.0010 | 0.0025 | 0.0017 | 0.0004 | 0.0021 | 0.0004 |
| σ2pe | 0.0050 | 0.0018 | – | – | 0.0024 | – | 0.0011 | – | 0.0007 |
| σ2lit | 0.0124 | 0.0072 | 0.0047 | 0.0026 | 0.0027 | 0.0100 | 0.0024 | 0.0093 | 0.0018 |
| σ2res | 0.0236 | 0.0364 | 0.0211 | 0.0143 | 0.0170 | 0.0442 | 0.0131 | 0.0372 | 0.0096 |
| σ2pheno | 0.0466 | 0.0500 | 0.0267 | 0.0180 | 0.0246 | 0.0559 | 0.0170 | 0.0487 | 0.0126 |
| s.e. | 0.0012 | 0.0013 | 0.0006 | 0.0005 | 0.0007 | 0.0013 | 0.0004 | 0.0012 | 0.0003 |
| h2 | 0.47 | 0.37 | 0.14 | 0.23 | 0.41 | 0.12 | 0.10 | 0.17 | 0.14 |
| s.e. | 0.07 | 0.07 | 0.04 | 0.06 | 0.07 | 0.04 | 0.04 | 0.05 | 0.05 |
| pe2 | 0.11 | 0.04 | – | – | 0.10 | – | 0.07 | – | 0.05 |
| s.e. | 0.02 | 0.01 | – | – | 0.02 | – | 0.02 | – | 0.02 |
| lit2 | 0.27 | 0.14 | 0.18 | 0.14 | 0.11 | 0.18 | 0.14 | 0.19 | 0.14 |
| s.e. | 0.02 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 |
Where σ2sire ∼ Sire variance, σ2pe ∼ variance of permanent environment due to the dam, σ2lit ∼variance due to Litter effects, σ2res ∼residual variance, σ2pheno∼ total phenotypic variance, s.e. ∼ standard error
Survival potential of Jamunapari goats from birth to 3 (3M), 6 (6M), 9 (9M) and 12 (12M) months of age using a sire model fitting either linear or generalized mixed model (Logit transformation).
| Transformation | Linear | Logit | ||||||
|---|---|---|---|---|---|---|---|---|
| Trait | 3M | 6M | 9M | 12M | 3M | 6M | 9M | 12M |
| σ2sire | 0.0006 | 0.0091 | 0.0179 | 0.0161 | 0.0000 | 0.1797 | 0.4010 | 0.3201 |
| σ2pe | 0.0011 | 0.0044 | 0.0073 | 0.0016 | 0.0885 | 0.2027 | 0.2256 | 0.0278 |
| σ2lit | 0.0163 | 0.0283 | 0.0241 | 0.0318 | 0.5754 | 0.3304 | 0.1397 | 0.2832 |
| σ2res | 0.0584 | 0.1030 | 0.1359 | 0.1592 | 3.3000 | 3.3000 | 3.3000 | 3.3000 |
| σ2pheno | 0.0764 | 0.1448 | 0.1852 | 0.2088 | 3.9638 | 4.0129 | 4.0663 | 3.9311 |
| s.e. | 0.0014 | 0.0031 | 0.0044 | 0.0047 | 0.1486 | 0.1164 | 0.1203 | 0.1037 |
| h2 | 0.03 | 0.25 | 0.39 | 0.31 | 0.00 | 0.18 | 0.39 | 0.33 |
| s.e. | 0.02 | 0.06 | 0.07 | 0.06 | 0.00 | 0.06 | 0.08 | 0.07 |
| pe2 | 0.01 | 0.03 | 0.04 | 0.01 | 0.02 | 0.05 | 0.06 | 0.01 |
| s.e. | 0.01 | 0.01 | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.02 |
| lit2 | 0.21 | 0.20 | 0.13 | 0.15 | 0.15 | 0.08 | 0.03 | 0.07 |
| s.e. | 0.02 | 0.02 | 0.02 | 0.02 | 0.05 | 0.03 | 0.03 | 0.02 |
Where σ2sire ∼ Sire variance, σ2pe ∼ variance of permanent environment due to the dam, σ2lit ∼variance due to Litter effects, σ2res ∼residual variance, σ2pheno∼ total phenotypic variance, s.e. ∼ standard error
Fig 1Direct Genetic trend of body weight at birth weight, 9 month and 12 months of age in Jamunapari goats.
Fig. 2Genetic trend of body weight due to sire effect at 3 month and 6 months of age in Jamunapari goats.