| Literature DB >> 30076288 |
Johanna Bergkvist1, Isabell Klawonn2,3, Martin J Whitehouse4, Gaute Lavik5, Volker Brüchert6, Helle Ploug7,8.
Abstract
Chain-forming diatoms are key class="Chemical">CO2-fixing organisms in the ocean. Under turbulent conditions they form fast-sinking aggregates that are exclass="Chemical">ported from the uclass="Chemical">pclass="Chemical">per sunlit ocean to the ocean interior. A decade-old class="Chemical">paradigm states that class="Chemical">primary class="Chemical">production in chain-forming diatoms is stimulated by turbulence. Yet, direct measurements of cell-sclass="Chemical">pecific class="Chemical">primary class="Chemical">production in individual field class="Chemical">poclass="Chemical">pulations of chain-forming diatoms are class="Chemical">poorlyEntities:
Year: 2018 PMID: 30076288 PMCID: PMC6076325 DOI: 10.1038/s41467-018-05149-w
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Fig. 1Diffusive boundary layers (DBL) surrounding chain-forming diatoms. The radial diffusion-limited concentration gradient across the DBL from the ambient water to cell surface for the middle cell under low turbulent shear (a) and under high turbulent shear (b)
Characteristics of Skeletonema and Chaetoceros
| Genera | Cell length | Cell width | Cell volume | Cellular POC cont.a | Cellular PON cont.a | Chain length | Abundance |
|---|---|---|---|---|---|---|---|
|
| 15 | 5 | 294 | 2.4 | 0.34 | 7.0 | 2.023 × 106 |
|
| 10 | 15 | 1766 | 10.3 | 1.6 | 4.3 | 1.486 × 106 |
Cell dimensions, cellular POC and PON content, chain length and abundance
POC: particulate organic carbon, PON: particulate organic nitrogen
aCalculated from the cellular dimensions (Menden-Deuer and Lessard[28])
Chemical parameters and assimilation rates
| Nitrite + Nitrate (µmol L−1) | 0.28 ± 0.36 |
| Ammonium (µmol L−1) | 0.176 ± 0.107 |
| Phosphate (µmol L−1) | 0.067 ± 0.005 |
| Silicate (µmol L−1) | 5.58 ± 0.36 |
| Chl. | 13.0 ± 4.0 |
| Chl. | 0.018 |
| POC (µmol L−1) | 57.8 ± 5.8 |
| PON (µmol L−1) | 5.9 ± 0.5 |
| C:N ratio (mol:mol) | 9.8 |
| C-assimilation rate (µmol C L−1 h−1) under still conditionsa | 1.56 ± 0.34 |
| C-assimilation rate (µmol C L−1 h−1) under turbulent sheara | 1.21 ± 0.15 |
| Nitrate-assimilation rate (µmol N L−1 h−1) under still conditionsa | 0.147 ± 0.016 |
| Nitrate-assimilation rate (µmol N L−1 h−1) under turbulent sheara | 0.137 ± 0.039 |
| Ammonium-assimilation rate (µmol N L−1 h−1) under still conditions | 0.023 ± 0.001 |
| C:Nitrate assimilation ratio under still conditions | 10.6 |
| C:Nitrate assimilation ratio under turbulent shear | 8.8 |
| C: (nitrate + ammonium) assimilation ratio under still conditions | 8.5 |
| Ammonium production rate (µmol N L−1 h−1) under still conditions | 0.019 ± 0.001 |
Nutrient concentrations, Chl.a, POC, and PON in ambient water. C-, nitrate and ammonium assimilation rates, and ammonium production rates of the phytoplankton community. The numbers are average values ± standard deviation of the mean value (n = 3)
POC: particulate organic carbon, PON: particulate organic nitrogen
aValues of community C- and nitrate-assimilation rates were statistically similar under still conditions and under turbulent shear (ANOVA two-way, p > 0.05)
Fig. 2SIMS images of Chaetoceros and Skeletonema cell chains. Chaetoceros (a, c, e) and Skeletonema (b, d, f) incubated with 13C-HCO3− and 15N-NO3−. The biomass distributions are demonstrated by the 12C14N- images (a, b). The unit represent counts per pixel (a, b). SIMS images of 15N:14N ratio (c, d) and 13C:12C ratio (e, f) reflect nitrate assimilation and C assimilation, respectively. The scale bars represent 20 μm
Fig. 3C- and nitrate-assimilation rates in individual cells. Each symbol represents the rates measured in individual cells of Skeletonema (open symbols) and of Chaetoceros (closed symbols) under still conditions (a) and under turbulent shear (b). The solid lines represent the Redfield ratio
Fig. 4C- and N-assimilation rates depending on position within cell chains. Cell-specific C- and nitrate (N) assimilation rate measured in cells positioned at the end or in the middle of cell chains (>7 cells chain−1). Skeletonema (a, c) and Chaetoceros (b, d) under still (black bars) and turbulent conditions (open bars). The bars represent the mean value and the error bars one standard deviation (n = 7–28)
Fig. 5C- and N-assimilation rates in the Skeletonema population and the Chaetoceros population. Cell-specific C-assimilation rates (a); Cell-specific N-assimilation rates (b); C-specific C-assimilation rates (c) and N-specific N-assimilation rates (d) in Chaetoceros (black bars) and Skeletonema (white bars) measured for nitrate as N sources and under still conditions or turbulent shear and at light intensities >200 μmol photons m−2 s−1. Ammonium assimilation rates were measured without turbulent shear and represent the average value in light and darkness. All values represent the average with one standard deviation (n = 70–262). Statistically significant differences are described in the text
C and N assimilation associated to Skeletonema and Chaetoceros
| Diatom | POC% | PON% | C assimilation% | NO3 assimilation% | NH4+ assimilation% |
|---|---|---|---|---|---|
| 9 | 12 | 2a | 8 | 6 | |
| 4a | 6 | nd | |||
| 27 | 38 | 10 | 38 | 35 | |
| 15 | 32 | nd |
POC: Particulate organic carbon, PON: particulate organic nitrogen
POC, PON, C-, nitrate assimilation and ammonium assimilation in % of the total phytoplankton community under still conditions and turbulent shear
aDifferences in cell-specific rates were statistically significant between still conditions and turbulent shear (two-way ANOVA, DF: 598; p < 0.0001)
Fig. 6The radial distribution of ammonium concentrations in sinking diatom aggregates. The concentrations were modeled from the measured ammonium release to the ambient water. An example of such an aggregate is shown in the picture. The white size bar is 3 mm
Fig. 7Average C- and N-assimilation rates as a function of cells analysed. Average cell-specific C-assimilation rate (closed symbols) or nitrate assimilation rate (open symbols) with the standard error of the mean as a function of cells analysed in Skeletonema (a) and in Chaetoceros (b) under turbulent shear