Literature DB >> 30071274

Thrombin binding aptamer analogues containing inversion of polarity sites endowed with antiproliferative and anti-motility properties against Calu-6 cells.

Veronica Esposito1, Annapina Russo1, Valentina Vellecco1, Mariarosaria Bucci1, Giulia Russo1, Luciano Mayol1, Antonella Virgilio2, Aldo Galeone3.   

Abstract

BACKGROUND: Although the thrombin binding aptamer (TBA) is endowed with both anticoagulant and antiproliferative properties, it is possible to reduce the first and enhance the second one by suitable chemical modifications.
METHODS: Two oligonucleotides (TBA353 and TBA535) based on the TBA sequence (GGTTGGTGTGGTTGG) and containing inversion of polarity sites have been investigated by CD, UV and electrophoretic techniques for their ability to form G-quadruplex structures. Furthermore, their anticoagulant (PT assay), antiproliferative (MTT assay) and anti-motility (wound healing assay) properties against Calu-6 cells have been tested and compared with TBA.
RESULTS: CD, UV and electrophoresis data indicate that both ODNs are able to form G-quadruplex structures. Particularly, results suggest that TBA535 adopts a G-quadruplex structure characterized by a loop arrangement different from that of TBA. Both TBA analogues drop the anticoagulant activity. However, TBA535 is endowed with a significant antiproliferative activity against lung cancer Calu-6 cells. Importantly, both TBA and TBA535 possess a remarkable anti-motility property against the same cell line.
CONCLUSIONS: Both TBA analogues TBA353 and TBA535 are able to form G-quadruplex structures with no anticoagulant activity. However only TBA535 is endowed with noteworthy antiproliferative and anti-motility properties against lung cancer Calu-6 cells. GENERAL SIGNIFICANCE: The switching from the anticoagulant to antiproliferative property can be obtained also in TBA derivatives not adopting the "chair-like" G-quadruplex structure typical of TBA. Furthermore, results have highlighted an unprecedented anti-cell-motility property of TBA and TBA535 reinforcing the potential of these ODNs as anticancer drugs.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Anti-motility activity; Antiproliferative activity; G-quadruplex; Inversion of polarity; Lung cancer cells; TBA analogues

Mesh:

Substances:

Year:  2018        PMID: 30071274     DOI: 10.1016/j.bbagen.2018.07.031

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gen Subj        ISSN: 0304-4165            Impact factor:   3.770


  10 in total

1.  Antiproliferative Effects of the Aptamer d(GGGT)4 and Its Analogues with an Abasic-Site Mimic Loop on Different Cancer Cells.

Authors:  Antonella Virgilio; Annalisa Pecoraro; Daniela Benigno; Annapina Russo; Giulia Russo; Veronica Esposito; Aldo Galeone
Journal:  Int J Mol Sci       Date:  2022-05-25       Impact factor: 6.208

2.  Investigating the properties of TBA variants with twin thrombin binding domains.

Authors:  Teresa Amato; Antonella Virgilio; Luciano Pirone; Valentina Vellecco; Mariarosaria Bucci; Emilia Pedone; Veronica Esposito; Aldo Galeone
Journal:  Sci Rep       Date:  2019-06-24       Impact factor: 4.379

Review 3.  Therapeutic Approaches Targeting Nucleolus in Cancer.

Authors:  Pietro Carotenuto; Annalisa Pecoraro; Gaetano Palma; Giulia Russo; Annapina Russo
Journal:  Cells       Date:  2019-09-16       Impact factor: 7.666

Review 4.  G-Quadruplex-Forming Aptamers-Characteristics, Applications, and Perspectives.

Authors:  Carolina Roxo; Weronika Kotkowiak; Anna Pasternak
Journal:  Molecules       Date:  2019-10-21       Impact factor: 4.411

Review 5.  Overview of the Therapeutic Potential of Aptamers Targeting Coagulation Factors.

Authors:  Max Liu; Khalequz Zaman; Yolanda M Fortenberry
Journal:  Int J Mol Sci       Date:  2021-04-09       Impact factor: 5.923

Review 6.  Advances in Screening and Development of Therapeutic Aptamers Against Cancer Cells.

Authors:  Zheng Li; Xuekun Fu; Jie Huang; Peiyuan Zeng; Yuhong Huang; Xinxin Chen; Chao Liang
Journal:  Front Cell Dev Biol       Date:  2021-05-19

7.  Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides.

Authors:  Matic Kovačič; Peter Podbevšek; Hisae Tateishi-Karimata; Shuntaro Takahashi; Naoki Sugimoto; Janez Plavec
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

8.  uL3 Mediated Nucleolar Stress Pathway as a New Mechanism of Action of Antiproliferative G-quadruplex TBA Derivatives in Colon Cancer Cells.

Authors:  Annalisa Pecoraro; Antonella Virgilio; Veronica Esposito; Aldo Galeone; Giulia Russo; Annapina Russo
Journal:  Biomolecules       Date:  2020-04-10

9.  Covalent Bi-Modular Parallel and Antiparallel G-Quadruplex DNA Nanocostructs Reduce Viability of Patient Glioma Primary Cell Cultures.

Authors:  Valeria Legatova; Nadezhda Samoylenkova; Alexander Arutyunyan; Vadim Tashlitsky; Elena Zavyalova; Dmitry Usachev; Galina Pavlova; Alexey Kopylov
Journal:  Int J Mol Sci       Date:  2021-03-25       Impact factor: 5.923

10.  A Comprehensive Analysis of the Thrombin Binding Aptamer Containing Functionalized Pyrrolo-2'-deoxycytidines.

Authors:  Weronika Kotkowiak; Zofia Jahnz-Wechmann; Anna Pasternak
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-18
  10 in total

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