Literature DB >> 30071154

Binding Studies on a Library of Induced-Fit Synthetic Carbohydrate Receptors with Mannoside Selectivity.

Kalanidhi Palanichamy1,2, M Fernando Bravo1,2,3, Milan A Shlain1,2, Frank Schiro1,2, Yasir Naeem1,2, Mateusz Marianski2,3, Adam B Braunschweig1,2,3,4.   

Abstract

Synthetic carbohydrate receptors could serve as agents for disease detection, drug delivery, or even therapeutics, however, they are rarely used for these applications because they bind weakly and with a preference towards the all-equatorial glucosides that are not prevalent on the cell surface. Herein the binding of 8 receptors with 5 distinct octyloxy pyranosides, which was measured by mass spectrometry and by 1 H NMR titrations in CD2 Cl2 at 298 K, is reported, providing binding affinities that vary from ≈101 -104  m-1 . Although the receptors are promiscuous, 1 shows selectivity for β-Man at a ratio of 103:1 β-Man:β-Gal, receptors 2-4 and 6 have preference for α-Man, 5 is selective for β-Gal, and 10 prefers α-Glc (Man=mannose; Gal=galactose, Glc=glucose). A variety of 1D and 2D NMR, and computational techniques were used to determine the thermodynamic binding parameters (ΔHo and ΔSo ) and the structure of the host-guest complex, revealing that dimeric receptor 10 binds β-Man with increased enthalpy, but a larger entropic penalty than 1. The first-principles modelling suggests that 10⋅β-Man forms an inclusion-type complex where the glycan engages both monomeric subunits of 10 through H-bonding and C-H⋅⋅⋅π interactions. Like natural glycan-binding proteins, these receptors bind pyranosides by accessing multivalent and cooperative interactions, and these studies suggest a new approach towards biomimetic synthetic carbohydrate receptors, where conformational flexibility and promiscuity are incorporated into design.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  carbohydrates; glycobiology; host-guest interactions; supramolecular chemistry; synthetic lectins

Year:  2018        PMID: 30071154     DOI: 10.1002/chem.201803317

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  4 in total

1.  Regiochemical Effects on the Carbohydrate Binding and Selectivity of Flexible Synthetic Carbohydrate Receptors with Indole and Quinoline Heterocyclic Groups.

Authors:  Khushabu Thakur; Milan A Shlain; Mateusz Marianski; Adam B Braunschweig
Journal:  European J Org Chem       Date:  2021-09-12

2.  Binding of synthetic carbohydrate receptors to enveloped virus glycans: Insights from molecular dynamics simulations.

Authors:  Beicer Tapia; Genrietta Yagudayeva; M Fernando Bravo; Khushabu Thakur; Adam B Braunschweig; Mateusz Marianski
Journal:  Carbohydr Res       Date:  2022-05-08       Impact factor: 2.975

Review 3.  Molecular Interrogation to Crack the Case of O-GlcNAc.

Authors:  Arielis Estevez; Dongsheng Zhu; Connor Blankenship; Jiaoyang Jiang
Journal:  Chemistry       Date:  2020-07-20       Impact factor: 5.236

4.  Binding modes of methyl α-d-glucopyranoside to an artificial receptor in crystalline complexes.

Authors:  Linda Köhler; Conrad Hübler; Wilhelm Seichter; Monika Mazik
Journal:  RSC Adv       Date:  2021-06-24       Impact factor: 4.036

  4 in total

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