Literature DB >> 30064661

The Making of a PreCancer Atlas: Promises, Challenges, and Opportunities.

Sudhir Srivastava1, Sharmistha Ghosh2, Jacob Kagan2, Richard Mazurchuk2.   

Abstract

Many cancers evolve from benign precancerous lesions and have a natural history of progression that provides a window of opportunity for intervention. The biological mechanisms underlying this evolutionary trajectory can only be truly understood through an extensive characterization of the molecular, cellular, and non-cellular properties of premalignant and malignant tumors, and must also recognize how the microenvironment (stromal cells, immune cells, and other types of cells) contributes to this evolution. We describe here the need to develop comprehensive molecular and cellular atlases for organ-specific premalignant lesions while capturing the spatial, structural, and functional changes over time that will provide a greater understanding of how premalignancy transitions to malignancy. The PreCancer Atlas (PCA) initiative, described in this Opinion, will address this need and aims to overcome the many challenges that currently plague the field. The hope is that PCAs will lead to the development of effective and timely interventions to prevent the development of invasive cancers.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  atlas; cellular; microenvironment; molecular; precancer; spatial; temporal; visualization

Mesh:

Year:  2018        PMID: 30064661     DOI: 10.1016/j.trecan.2018.06.007

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  10 in total

Review 1.  Anatomical structures, cell types and biomarkers of the Human Reference Atlas.

Authors:  Katy Börner; Sarah A Teichmann; Ellen M Quardokus; James C Gee; Kristen Browne; David Osumi-Sutherland; Bruce W Herr; Andreas Bueckle; Hrishikesh Paul; Muzlifah Haniffa; Laura Jardine; Amy Bernard; Song-Lin Ding; Jeremy A Miller; Shin Lin; Marc K Halushka; Avinash Boppana; Teri A Longacre; John Hickey; Yiing Lin; M Todd Valerius; Yongqun He; Gloria Pryhuber; Xin Sun; Marda Jorgensen; Andrea J Radtke; Clive Wasserfall; Fiona Ginty; Jonhan Ho; Joel Sunshine; Rebecca T Beuschel; Maigan Brusko; Sujin Lee; Rajeev Malhotra; Sanjay Jain; Griffin Weber
Journal:  Nat Cell Biol       Date:  2021-11-08       Impact factor: 28.824

2.  Editorial: Cancer Prevention: Targeting Premalignant Epithelial Neoplasms in the Era of Cancer Immunotherapy and Vaccines.

Authors:  Nicolas Çuburu; Olivera J Finn; Sjoerd H Van Der Burg
Journal:  Front Immunol       Date:  2022-05-24       Impact factor: 8.786

3.  Qualifying antibodies for image-based immune profiling and multiplexed tissue imaging.

Authors:  Ziming Du; Jia-Ren Lin; Rumana Rashid; Zoltan Maliga; Shu Wang; Jon C Aster; Benjamin Izar; Peter K Sorger; Sandro Santagata
Journal:  Nat Protoc       Date:  2019-09-18       Impact factor: 13.491

4.  Serial genomic analysis of endometrium supports the existence of histologically indistinct endometrial cancer precursors.

Authors:  Mitzi Aguilar; He Zhang; Musi Zhang; Brandi Cantarell; Subhransu S Sahoo; Hao-Dong Li; Ileana C Cuevas; Jayanthi Lea; David S Miller; Hao Chen; Wenxin Zheng; Jeffrey Gagan; Elena Lucas; Diego H Castrillon
Journal:  J Pathol       Date:  2021-03-09       Impact factor: 7.996

5.  Highly multiplexed immunofluorescence images and single-cell data of immune markers in tonsil and lung cancer.

Authors:  Rumana Rashid; Giorgio Gaglia; Yu-An Chen; Jia-Ren Lin; Ziming Du; Zoltan Maliga; Denis Schapiro; Clarence Yapp; Jeremy Muhlich; Artem Sokolov; Peter Sorger; Sandro Santagata
Journal:  Sci Data       Date:  2019-12-17       Impact factor: 6.444

6.  Somatic whole genome dynamics of precancer in Barrett's esophagus reveals features associated with disease progression.

Authors:  Thomas G Paulson; Patricia C Galipeau; Kenji M Oman; Carissa A Sanchez; Mary K Kuhner; Lucian P Smith; Kevin Hadi; Minita Shah; Kanika Arora; Jennifer Shelton; Molly Johnson; Andre Corvelo; Carlo C Maley; Xiaotong Yao; Rashesh Sanghvi; Elisa Venturini; Anne-Katrin Emde; Benjamin Hubert; Marcin Imielinski; Nicolas Robine; Brian J Reid; Xiaohong Li
Journal:  Nat Commun       Date:  2022-04-28       Impact factor: 17.694

Review 7.  Lung Cancer and Immunity Markers.

Authors:  Raymond J Lim; Bin Liu; Kostyantyn Krysan; Steven M Dubinett
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2020-08-20       Impact factor: 4.254

Review 8.  Spatial architecture of the immune microenvironment orchestrates tumor immunity and therapeutic response.

Authors:  Tong Fu; Lei-Jie Dai; Song-Yang Wu; Yi Xiao; Ding Ma; Yi-Zhou Jiang; Zhi-Ming Shao
Journal:  J Hematol Oncol       Date:  2021-06-25       Impact factor: 17.388

Review 9.  The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.

Authors:  Orit Rozenblatt-Rosen; Aviv Regev; Philipp Oberdoerffer; Tal Nawy; Anna Hupalowska; Jennifer E Rood; Orr Ashenberg; Ethan Cerami; Robert J Coffey; Emek Demir; Li Ding; Edward D Esplin; James M Ford; Jeremy Goecks; Sharmistha Ghosh; Joe W Gray; Justin Guinney; Sean E Hanlon; Shannon K Hughes; E Shelley Hwang; Christine A Iacobuzio-Donahue; Judit Jané-Valbuena; Bruce E Johnson; Ken S Lau; Tracy Lively; Sarah A Mazzilli; Dana Pe'er; Sandro Santagata; Alex K Shalek; Denis Schapiro; Michael P Snyder; Peter K Sorger; Avrum E Spira; Sudhir Srivastava; Kai Tan; Robert B West; Elizabeth H Williams
Journal:  Cell       Date:  2020-04-16       Impact factor: 66.850

10.  Mutational profiling of micro-dissected pre-malignant lesions from archived specimens.

Authors:  Daniela Nachmanson; Joseph Steward; Huazhen Yao; Adam Officer; Eliza Jeong; Thomas J O'Keefe; Farnaz Hasteh; Kristen Jepsen; Gillian L Hirst; Laura J Esserman; Alexander D Borowsky; Olivier Harismendy
Journal:  BMC Med Genomics       Date:  2020-11-18       Impact factor: 3.063

  10 in total

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