| Literature DB >> 30064357 |
Aurélie Daumas1,2, Julie Alingrin3,4, Richard Ouedraogo3, Patrick Villani5, Marc Leone3,4, Jean-Louis Mege3.
Abstract
BACKGROUND: MALDI-TOF mass spectrometry (MS) on whole cells enables the detection of different cell types and cell activation. Here, we wondered whether this approach would be useful to investigate the host response in sepsis.Entities:
Keywords: CpG oligonucleotides; IFN-γ; Interleukin-10; MALDI-TOF; Mass spectrometry; Mononuclear cells; Sepsis
Mesh:
Substances:
Year: 2018 PMID: 30064357 PMCID: PMC6069833 DOI: 10.1186/s12879-018-3266-7
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1MALDI-TOF MS spectra of PBMCs. The PBMCs (1 × 106 cells) from ten healthy donors (a) and ten septic patients (b) were suspended in 10 μL of PBS, and 1 μL was deposited onto the MALDI target. Representative MALDI-TOF MS spectra are shown. MALDI-TOF MS spectra were analyzed using statistical analysis software R (version 2.13)
Fig. 2Dendrogram representation of PBMCs. The dendrogram constructed by Ouedraogo et al. [17] was implemented with reference spectra of PBMCs from two healthy donors and two septic patients. The Biotyper (Bruker Daltonics) software was used to create an averaged spectrum for each patient, corresponding to at least 10 individual spectra. The averaged spectra were added to the database using the Biotyper software and the dendrogram creation method. Peripheral blood mononuclear cells (PBMCs); polymorphonuclear cells (PMNs); dendritic cells (DCs); monocyte-derived macrophages (MDMs); bone marrow-derived macrophages (BMDMs); red blood cells (RBCs)
Peak characteristics of PBMCs
| Healthy donors | Gram-negative bacillus bacteremia | Patients without documented infection | |
|---|---|---|---|
| 2165 | |||
| 2227 | |||
| 2302 | |||
| 2503 | |||
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| 2777 | |||
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| 2942 | 2942 | ||
| 3329 | 3329 | ||
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| 3363 | |||
| 3369 | 3369 | 3369 | 3369 |
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| 3441 | 3441 | 3441 | 3441 |
| 3455 | |||
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| 3485 | 3485 | 3485 | 3485 |
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| 3881 | |||
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| 4642 | |||
| 4935 | 4935 | 4935 | 4935 |
| 4961 | 4961 | 4961 | 4961 |
| 4983 | 4983 | 4983 | 4983 |
| 5023 | |||
| 5415 | 5415 | ||
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| 6574 | 6574 | 6574 | 6574 |
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| 7762 | 7762 | 7762 | 7762 |
| 8561 | 8561 | 8561 | 8561 |
| 9285 | 9285 | 9285 | 9285 |
| 10,259 | 10,259 | 10,259 | 10,259 |
|
|
|
| |
| 10,831 | 10,831 | 10,831 | 10,831 |
The PBMCs from healthy donors and septic patients were analyzed by MALDI-TOF MS
The m/z ratio of peaks is shown. The peaks that were common to septic patients are underlined
Fig. 3Gel view representation of activated PBMCs. The PBMCs from healthy donors were stimulated with 20 ng/ml IFN-γ, IL-4, IL-10 or 1 μg/mL LPS for 18 h. The spectra were arranged in a pseudo-gel format using a gel view representation. Vertical axis refers to the m/z ratio. Spectra are classified according to the presence/absence of peaks. Unstimulated PBMCs are presented in white
Fig. 4Hierarchical clustering of activated PBMCs. PBMCs were stimulated with different agonists for 18 h. The results are shown as hierarchical clustering. Vertical axis refers to the m/z ratio. Spectra are classified according to the presence/absence of peaks. PBMCs stimulated with LPS from Escherichia coli are presented in yellow, with Pseudomonas aeruginosa (P.a) in red, Escherichia coli (E.c) in orange, CpG ODN in dark green, PGN in green, Staphylococcus aureus (S.a) in blue, Streptococcus agalactiae (S.ag) in turquoise, unstimulated PBMCs in purple and PBMCs stimulated with poly I:C in dark blue
Fig. 5Comparison between in vitro and in vivo data. Averaged spectra of PBMCs stimulated in vitro by different agonists were generated from the database using the Biotyper software. The spectra (n = 16) from four patients with E. coli bacteremia, two patients with S. aureus bacteremia and six patients with undocumented infection were then compared with the averaged spectra of the database. Scatter plots of one representative septic patient with E. coli infection (a), S. aureus infection (b) or without microbiological documentation (c) are presented. Matching scores between each spectrum from patients and averaged spectra from the database are represented with circles. Horizontal lines represent the medians of matching scores; a value higher than 1.5 was considered significant and allowed confident identification of the activation status of PBMCs. The nonparametric Mann-Whitney U test was used to compare scores with the averaged spectra of the database