| Literature DB >> 30062180 |
Nick E J West1, Joseph P Corrigan2, Richard H G Owen2, Stephen P Hoole1, Adam J Brown1, Stephen Blatcher2, Andrew C Newby3.
Abstract
A percutaneous catheter device, the Liquid Biopsy System, was developed to sample the unstirred boundary layer of blood upstream and downstream of intact and disrupted human coronary atherosclerotic plaques. Using multiplexed proximity extension assays, release of 20 biomolecules was simultaneously detected in samples taken across plaques before balloon angioplasty, including the soluble form of the endothelial lectin-like oxidized LDL receptor. Additional biomolecules, including matrix metalloproteinase-12, were released after plaque disruption with angioplasty. These experiments demonstrate the power of the Liquid Biopsy System to yield new scientific insights and its ultimate potential to generate new biomarkers and surrogate endpoints for clinical trials.Entities:
Keywords: EC, endothelial cell; FDR, false discovery rate; MI, myocardial infarction; MMP, matrix metalloproteinase; SMC, smooth muscle cell; biomolecule release; coronary atherosclerosis; inflammation; vulnerable plaque
Year: 2017 PMID: 30062180 PMCID: PMC6058996 DOI: 10.1016/j.jacbts.2017.07.007
Source DB: PubMed Journal: JACC Basic Transl Sci ISSN: 2452-302X
Figure 1Boundary Layer Phenomenon and Concept of the Liquid Biopsy System
(A) Atherosclerotic plaque-associated biomolecules remained trapped in a discrete flow layer adjacent to the vessel wall (blue zone). (B) The LBS, designed specifically to mix and sample from this boundary layer, is passed over a standard intracoronary guidewire used in all coronary angioplasty and stent procedures. (C) Once positioned, the LBS sheath is retracted, deploying dedicated mixing structures that disrupt the boundary later and divert entrained biomolecules into the bulk flow from where they may be simultaneously sampled directly by vacuum suction through 1 of 4 discrete ports equally spaced along the catheter. (D) Differential concentrations of such biomolecules may then be measured by multiplex assays to determine transplaque, intracoronary gradients. LBS = Liquid Biopsy System.
Figure 2Expression of Plaque-Associated Biomolecules in Unobstructed Coronary Arteries, Across Obstructive/Narrowed Lesions and After Angioplasty of Coronary Atherosclerotic Plaques
(A) A summary is shown of biomarker gradients measured in blood sampled across the proximal to distal ports of the LBS system. (B) In 1 study, samples were taken from unobstructed vessels (green vessel). (C) In a separate study, samples were taken from narrowed or obstructive atherosclerotic plaques, where possible, before balloon dilation (yellow vessel) and in the same and other vessels (D) (red vessel) after balloon dilation. Data are volcano plots, with each identified biomolecular gradient represented by a single point, with effect size (median percentage of change of biomolecule concentration over a distance of 6 cm [PP-DP] within coronary artery) plotted on the x-axis and statistical significance (−log10[p value]) on the y-axis. The dashed horizontal line on each graph represents corrected threshold for significance of each gradient (p[FDR] <0.05); the vertical dashed line represents zero gradient. p(FDR) = false discovery rate p value; NPX = normalized protein expression.
Gradients Detected Across Atherosclerotic Plaques
| HUGO Designation | Molecule | Δ Concentration (NPX) | p(FDR) | Δ(%)/Sampling Length |
|---|---|---|---|---|
| Before balloon dilation | ||||
| OLR1 | Oxidized LDL receptor 1 (LOX-1) | 20.01 (−5.2 to 137.1) | <0.05 | 53.2 |
| EGF | Epidermal growth factor | 23.9 (−19.3 to 62.0) | <0.005 | 47.8 |
| IL-16 | Interleukin-16 | 2.8 (−3.2 to 30.0) | <0.05 | 39.0 |
| CD40LG | sCD40 ligand | 1.6 (−1.3 to 5.6) | <0.005 | 27.6 |
| CXCL1 | C-X-C motif chemokine 1 (Gro-a, GRO1, NAP-3, KC) | 12.3 (1.3 to 60.1) | <0.005 | 26.7 |
| TNFSF14 | Tumor necrosis factor ligand superfamily member 14 | 0.4 (−0.3 to 4.7) | <0.05 | 26.5 |
| CXCL5/6 | C-X-C motif chemokine 6 (GCP2) | 6.1 (0.6 to 23.1) | <0.005 | 24.7 |
| PDGFB | Platelet-derived growth factor subunit B | 12.9 (−4.0 to 41.6) | <0.005 | 24.5 |
| IL-8 | Interleukin-8 | 3.3 (−1.3 to 51.4) | <0.05 | 24.1 |
| IL1RN | Interleukin-1 receptor antagonist protein | 1.8 (0.2 to 7.0) | <0.005 | 15.5 |
| RETN | Resistin | 10.6 (−3.9 to 16.5) | <0.05 | 12.9 |
| DKK1 | Dickkopf-related protein 1 | 2.9 (0.2 to 12.0) | <0.005 | 10.5 |
| PLAUR | Urokinase plasminogen activator surface receptor | 20.9 (−7.0 to 106.1) | <0.05 | 6.9 |
| CCL4 | C-C motif chemokine-4 (MIP-1β) | 4.5 (−1.3 to 10.9) | <0.05 | 6.4 |
| HBEGF | Heparin-binding EGF-like growth factor | 2.6 (−1.2 to 0.1) | <0.05 | 5.4 |
| After balloon dilation | ||||
| HSPB1 | Heat shock 27-kDa protein | 1.1 (−4.5 to 54.2) | <0.05 | 26.11 |
| EGF | Epidermal growth factor | 10.1 (−35.2 to 67.4) | <0.05 | 21.05 |
| PDGFB | Platelet-derived growth factor subunit B | 8.6 (−35.6 to 81.0) | <0.05 | 18.26 |
| CXCL5/6 | C-X-C motif chemokine 6 (GCP2) | 3.2 (−7.3 to 39.2) | <0.05 | 16.59 |
| MMP-12 | Matrix metalloproteinase-12 | 8.7 (−20.3 to 153.2) | <0.05 | 14.48 |
| IL-8 | Interleukin-8 | 1.8 (−6.1 to 14.6) | <0.05 | 10.19 |
| DKK1 | Dickkopf-related protein 1 | 2.8 (−9.4 to 11.2) | <0.05 | 8.60 |
| CCL2 | Monocyte chemotactic protein 1 (MCP-1) | 14.9 (−88.5 to 119.9) | <0.05 | 6.39 |
| HBEGF | Heparin-binding EGF-like growth factor | 2.5 (−12.7 to 10.3) | <0.05 | 4.44 |
Blood sampling across coronary plaques was achieved using the Liquid Biopsy System before balloon dilation and after balloon dilation. Proximal and distal measurements of the biomolecules, identified by their HUGO designations, were used to calculate the change in concentration across plaques, which are shown as median values (range), measured by proximity extension assay multiplex assays and expressed in ΔNPX units. The significance of gradients is indicated by p(FDR) values. To aid comparison between different analytes, NPX values were further used to calculate the median percentage change in concentration across the sampling distance.
p(FDR) = false discovery rate p values; HUGO = Human Genome Organization; LDL = low-density lipoprotein; NPX = normalized protein expression.
Figure 3Example Box-and-Whisker Plots Illustrate Changes in Biomolecule Concentrations Across Coronary Atherosclerotic Plaques
Paired summary figures show concentration of biomolecules at proximal (prox), mid, and distal sampling ports of LBS. The upper row shows samples obtained before and the bottom row balloon pre-dilation of plaque. False discovery rate p values are noted at top right of each graph; p(FDR) <0.05 indicates significant changes in biomolecular gradients. Sampled biomolecules labeled by Human Genome Organization designation show significant gradients in oxidized low-density lipoprotein receptor-1/LOX-1 (OLR1) before but not after balloon dilation; in matrix metalloproteinase (MMP)-12 after but not before dilation; in interleukin (IL)-8; and in platelet-derived growth factor B (PDGFB) before and after balloon dilation; and no gradient in growth hormone (GH), acting as a negative control. Box and whisker plots show median, interquartile range, and range, with outliers designated as points. Abbreviations as in Figures 1 and 2.