Literature DB >> 30052291

Enthalpic stabilization of an SH3 domain by D2 O.

Samantha S Stadmiller1, Gary J Pielak1,2,3,4.   

Abstract

The stability of a protein is vital for its biological function, and proper folding is partially driven by intermolecular interactions between protein and water. In many studies, H2 O is replaced by D2 O because H2 O interferes with the protein signal. Even this small perturbation, however, affects protein stability. Studies in isotopic waters also might provide insight into the role of solvation and hydrogen bonding in protein folding. Here, we report a complete thermodynamic analysis of the reversible, two-state, thermal unfolding of the metastable, 7-kDa N-terminal src-homology 3 domain of the Drosophila signal transduction protein drk in H2 O and D2 O using one-dimensional 19 F NMR spectroscopy. The stabilizing effect of D2 O compared with H2 O is enthalpic and has a small to insignificant effect on the temperature of maximum stability, the entropy, and the heat capacity of unfolding. We also provide a concise summary of the literature about the effects of D2 O on protein stability and integrate our results into this body of data.
© 2018 The Protein Society.

Entities:  

Keywords:  NMR spectroscopy; SH3 domain; deuterium oxide; protein folding; protein stability; solvent isotope effect; thermodynamics

Mesh:

Substances:

Year:  2018        PMID: 30052291      PMCID: PMC6194290          DOI: 10.1002/pro.3477

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  57 in total

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Authors:  Ferenc Evanics; Irina Bezsonova; Joseph Marsh; Julianne L Kitevski; Julie D Forman-Kay; R Scott Prosser
Journal:  Biochemistry       Date:  2006-11-28       Impact factor: 3.162

4.  Global analysis of the thermal and chemical denaturation of the N-terminal domain of the ribosomal protein L9 in H2O and D2O. Determination of the thermodynamic parameters, deltaH(o), deltaS(o), and deltaC(o)p and evaluation of solvent isotope effects.

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Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

5.  H/D isotope effects in protein thermal denaturation: the case of bovine serum albumin.

Authors:  Ling Fu; Sandrine Villette; Stéphane Petoud; Felix Fernandez-Alonso; Marie-Louise Saboungi
Journal:  J Phys Chem B       Date:  2011-02-03       Impact factor: 2.991

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Journal:  J Biochem       Date:  1974-05       Impact factor: 3.387

7.  The effect of D2-O on the thermal stability of proteins. Thermodynamic parameters for the transfer of model compounds from H2-O to D2-O.

Authors:  G C Kresheck; H Schneider; H A Scheraga
Journal:  J Phys Chem       Date:  1965-09

8.  Suppression of microtubule dynamic instability and treadmilling by deuterium oxide.

Authors:  D Panda; G Chakrabarti; J Hudson; K Pigg; H P Miller; L Wilson; R H Himes
Journal:  Biochemistry       Date:  2000-05-02       Impact factor: 3.162

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Authors:  G I Makhatadze; G M Clore; A M Gronenborn
Journal:  Nat Struct Biol       Date:  1995-10

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Journal:  Biochem J       Date:  1968-12       Impact factor: 3.857

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  2 in total

1.  Direct observation of protein structural transitions through entire amyloid aggregation processes in water using 2D-IR spectroscopy.

Authors:  So Yeon Chun; Myung Kook Son; Chae Ri Park; Chaiho Lim; Hugh I Kim; Kyungwon Kwak; Minhaeng Cho
Journal:  Chem Sci       Date:  2022-03-18       Impact factor: 9.969

2.  Selectivity for water isotopologues within metal organic nanotubes.

Authors:  Maurice K Payne; Lindsey C Applegate; Priyanka Singh; Ashini S Jayasinghe; George B Crull; Andrea B Grafton; Christopher M Cheatum; Tori Z Forbes
Journal:  RSC Adv       Date:  2021-05-06       Impact factor: 3.361

  2 in total

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