Literature DB >> 30051593

Ligand Design to Acquire Specificity to Intended G-Quadruplex Structures.

Sefan Asamitsu1, Toshikazu Bando1, Hiroshi Sugiyama1,2.   

Abstract

A G-quadruplex is a nucleic acid secondary structure that is adopted by guanine-rich sequences, and is considered to be relevant in various pharmacological and biological contexts. G-Quadruplexes have also attracted great attention in the field of DNA nanotechnology because of their extremely high thermal stability and the availability of many defined structures. To date, a large repertory of DNA/RNA G-quadruplex-interactive ligands has been developed by numerous laboratories. Several relevant reviews have also been published that have helped researchers to grasp the full scope of G-quadruplex research from its outset to the present. This review focuses on the G-quadruplex ligands that allow targeting of specific G-quadruplexes. Moreover, unique ligands, successful methodologies, and future perspectives in relation to specific G-quadruplex recognition are also addressed.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA; G-quadruplexes; RNA; molecular recognition; noncovalent interactions

Year:  2018        PMID: 30051593     DOI: 10.1002/chem.201802691

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  27 in total

1.  Subtle structural alterations in G-quadruplex DNA regulate site specificity of fluorescence light-up probes.

Authors:  Rajendra Kumar; Karam Chand; Sudipta Bhowmik; Rabindra Nath Das; Snehasish Bhattacharjee; Mattias Hedenström; Erik Chorell
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

Review 2.  Development of RNA G-quadruplex (rG4)-targeting L-RNA aptamers by rG4-SELEX.

Authors:  Mubarak I Umar; Chun-Yin Chan; Chun Kit Kwok
Journal:  Nat Protoc       Date:  2022-04-20       Impact factor: 13.491

3.  Drug discovery of small molecules targeting the higher-order hTERT promoter G-quadruplex.

Authors:  Robert C Monsen; Jon M Maguire; Lynn W DeLeeuw; Jonathan B Chaires; John O Trent
Journal:  PLoS One       Date:  2022-06-16       Impact factor: 3.752

4.  Naphthalene Diimides Carrying Two β-Cyclodextrins Prefer Telomere RNA G-Quadruplex Recognition.

Authors:  Tingting Zou; Yuka Sato; Shuma Kaneyoshi; Kota Mano; Rui Yasukawa; Yoshifumi Nakano; Satoshi Fujii; Shinobu Sato; Shigeori Takenaka
Journal:  Molecules       Date:  2022-06-23       Impact factor: 4.927

Review 5.  Modulation of DNA structure formation using small molecules.

Authors:  Imee M A Del Mundo; Karen M Vasquez; Guliang Wang
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2019-09-03       Impact factor: 4.739

6.  New substituted quinoxalines inhibit triple-negative breast cancer by specifically downregulating the c-MYC transcription.

Authors:  Ming-Hao Hu; Tian-Ying Wu; Qiong Huang; Guangyi Jin
Journal:  Nucleic Acids Res       Date:  2019-11-18       Impact factor: 16.971

7.  Solution Structure of Ternary Complex of Berberine Bound to a dGMP-Fill-In Vacancy G-Quadruplex Formed in the PDGFR-β Promoter.

Authors:  Kai-Bo Wang; Jonathan Dickerhoff; Danzhou Yang
Journal:  J Am Chem Soc       Date:  2021-09-29       Impact factor: 16.383

8.  Multiple G-quadruplex binding ligand induced transcriptomic map of cancer cell lines.

Authors:  Amjesh Revikumar; Vivek Kashyap; Akhina Palollathil; Anjana Aravind; Rajeswari Raguraman; Kenkere Mallikarjunaiah Kiran Kumar; Manavalan Vijayakumar; Thottethodi Subrahmanya Keshava Prasad; Rajesh Raju
Journal:  J Cell Commun Signal       Date:  2021-07-26       Impact factor: 5.782

9.  Asymmetrically Substituted Quadruplex-Binding Naphthalene Diimide Showing Potent Activity in Pancreatic Cancer Models.

Authors:  Ahmed A Ahmed; Richard Angell; Sally Oxenford; Jenny Worthington; Nicole Williams; Naomi Barton; Thomas G Fowler; Daniel E O'Flynn; Mihiro Sunose; Matthew McConville; Tam Vo; W David Wilson; Saadia A Karim; Jennifer P Morton; Stephen Neidle
Journal:  ACS Med Chem Lett       Date:  2020-07-16       Impact factor: 4.345

Review 10.  From Prebiotic Chemistry to Supramolecular Biomedical Materials: Exploring the Properties of Self-Assembling Nucleobase-Containing Peptides.

Authors:  Pasqualina Liana Scognamiglio; Chiara Platella; Ettore Napolitano; Domenica Musumeci; Giovanni Nicola Roviello
Journal:  Molecules       Date:  2021-06-10       Impact factor: 4.927

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