Literature DB >> 30049804

Shotgun Metagenomic Detection of Pathogens: a Micro-Comic Strip.

Alexander J McAdam1.   

Abstract

Keywords:  metagenomics; molecular testing; next-generation sequencing

Mesh：

Year:  2018        PMID： 30049804      PMCID： PMC6062782          DOI： 10.1128/JCM.00799-18

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


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  10 in total

Review 1.  Towards a Universal Molecular Microbiological Test.

Authors:  Richard J N Allcock; Amy V Jennison; David Warrilow
Journal:  J Clin Microbiol       Date:  2017-08-23       Impact factor: 5.948

2.  Use of Shotgun Metagenome Sequencing To Detect Fecal Colonization with Multidrug-Resistant Bacteria in Children.

Authors:  Heidi Andersen; Natalia Connolly; Hansraj Bangar; Mary Staat; Joel Mortensen; Barbara Deburger; David B Haslam
Journal:  J Clin Microbiol       Date:  2016-04-27       Impact factor: 5.948

3.  Metagenomic Approach for Identification of the Pathogens Associated with Diarrhea in Stool Specimens.

Authors:  Yanjiao Zhou; Kristine M Wylie; Rana E El Feghaly; Kathie A Mihindukulasuriya; Alexis Elward; David B Haslam; Gregory A Storch; George M Weinstock
Journal:  J Clin Microbiol       Date:  2015-12-04       Impact factor: 5.948

Review 4.  State-of-the-Art Microbiologic Testing for Community-Acquired Meningitis and Encephalitis.

Authors:  Christopher R Polage; Stuart H Cohen
Journal:  J Clin Microbiol       Date:  2016-02-17       Impact factor: 5.948

5.  Identification of Prosthetic Joint Infection Pathogens Using a Shotgun Metagenomics Approach.

Authors:  Matthew J Thoendel; Patricio R Jeraldo; Kerryl E Greenwood-Quaintance; Janet Z Yao; Nicholas Chia; Arlen D Hanssen; Matthew P Abdel; Robin Patel
Journal:  Clin Infect Dis       Date:  2018-10-15       Impact factor: 9.079

6.  Diagnosis of Capnocytophaga canimorsus Sepsis by Whole-Genome Next-Generation Sequencing.

Authors:  Maria K Abril; Adam S Barnett; Kara Wegermann; Eric Fountain; Andrew Strand; Benjamin M Heyman; Britton A Blough; Aparna C Swaminathan; Batu Sharma-Kuinkel; Felicia Ruffin; Barbara D Alexander; Chad M McCall; Sylvia F Costa; Murat O Arcasoy; David K Hong; Timothy A Blauwkamp; Michael Kertesz; Vance G Fowler; Bryan D Kraft
Journal:  Open Forum Infect Dis       Date:  2016-07-12       Impact factor: 3.835

7.  A novel cause of chronic viral meningoencephalitis: Cache Valley virus.

Authors:  Michael R Wilson; Dan Suan; Andrew Duggins; Ryan D Schubert; Lillian M Khan; Hannah A Sample; Kelsey C Zorn; Aline Rodrigues Hoffman; Anna Blick; Meena Shingde; Joseph L DeRisi
Journal:  Ann Neurol       Date:  2017-07       Impact factor: 10.422

8.  Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.

Authors:  Charles Y Chiu; Lark L Coffey; Jamie Murkey; Kelly Symmes; Hannah A Sample; Michael R Wilson; Samia N Naccache; Shaun Arevalo; Sneha Somasekar; Scot Federman; Doug Stryke; Paul Vespa; Gary Schiller; Sharon Messenger; Romney Humphries; Steve Miller; Jeffrey D Klausner
Journal:  Emerg Infect Dis       Date:  2017-10       Impact factor: 6.883

9.  Molecular Diagnosis of Orthopedic-Device-Related Infection Directly from Sonication Fluid by Metagenomic Sequencing.

Authors:  Teresa L Street; Nicholas D Sanderson; Bridget L Atkins; Andrew J Brent; Kevin Cole; Dona Foster; Martin A McNally; Sarah Oakley; Leon Peto; Adrian Taylor; Tim E A Peto; Derrick W Crook; David W Eyre
Journal:  J Clin Microbiol       Date:  2017-05-10       Impact factor: 5.948

10.  Viral Surveillance in Serum Samples From Patients With Acute Liver Failure By Metagenomic Next-Generation Sequencing.

Authors:  Sneha Somasekar; Deanna Lee; Jody Rule; Samia N Naccache; Mars Stone; Michael P Busch; Corron Sanders; William M Lee; Charles Y Chiu
Journal:  Clin Infect Dis       Date:  2017-10-16       Impact factor: 9.079
  10 in total

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