Literature DB >> 30046789

Elucidation of the roles of conserved residues in the biosynthesis of the lasso peptide paeninodin.

Julian D Hegemann1, Christopher J Schwalen2, Douglas A Mitchell2, Wilfred A van der Donk3.   

Abstract

Substrate binding assays, in vitro proteolytic processing assays, and heterologous lasso peptide production were used to investigate the roles of conserved precursor peptide residues during paeninodin maturation. Specifically, we delineate which residues are important for substrate recognition, proteolysis, and lasso peptide macrocyclization.

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Year:  2018        PMID： 30046789      PMCID： PMC6092944          DOI： 10.1039/c8cc04411b

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN： 1359-7345            Impact factor:   6.222


  25 in total

1.  Chaxapeptin, a Lasso Peptide from Extremotolerant Streptomyces leeuwenhoekii Strain C58 from the Hyperarid Atacama Desert.

Authors:  Somayah S Elsayed; Franziska Trusch; Hai Deng; Andrea Raab; Ivan Prokes; Kanungnid Busarakam; Juan A Asenjo; Barbara A Andrews; Pieter van West; Alan T Bull; Michael Goodfellow; Yu Yi; Rainer Ebel; Marcel Jaspars; Mostafa E Rateb
Journal:  J Org Chem       Date:  2015-09-24       Impact factor: 4.354

2.  Elucidating the Specificity Determinants of the AtxE2 Lasso Peptide Isopeptidase.

Authors:  Mikhail O Maksimov; Joseph D Koos; Chuhan Zong; Bozhena Lisko; A James Link
Journal:  J Biol Chem       Date:  2015-11-03       Impact factor: 5.157

3.  Lassomycin, a ribosomally synthesized cyclic peptide, kills mycobacterium tuberculosis by targeting the ATP-dependent protease ClpC1P1P2.

Authors:  Ekaterina Gavrish; Clarissa S Sit; Shugeng Cao; Olga Kandror; Amy Spoering; Aaron Peoples; Losee Ling; Ashley Fetterman; Dallas Hughes; Anthony Bissell; Heather Torrey; Tatos Akopian; Andreas Mueller; Slava Epstein; Alfred Goldberg; Jon Clardy; Kim Lewis
Journal:  Chem Biol       Date:  2014-03-27

Review 4.  Lasso peptides: an intriguing class of bacterial natural products.

Authors:  Julian D Hegemann; Marcel Zimmermann; Xiulan Xie; Mohamed A Marahiel
Journal:  Acc Chem Res       Date:  2015-06-16       Impact factor: 22.384

5.  Precursor-centric genome-mining approach for lasso peptide discovery.

Authors:  Mikhail O Maksimov; István Pelczer; A James Link
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

6.  The astexin-1 lasso peptides: biosynthesis, stability, and structural studies.

Authors:  Marcel Zimmermann; Julian D Hegemann; Xiulan Xie; Mohamed A Marahiel
Journal:  Chem Biol       Date:  2013-04-18

7.  Molecular cloning of the gene cluster for lariatin biosynthesis of Rhodococcus jostii K01-B0171.

Authors:  Junji Inokoshi; Maki Matsuhama; Midori Miyake; Haruo Ikeda; Hiroshi Tomoda
Journal:  Appl Microbiol Biotechnol       Date:  2012-03-03       Impact factor: 4.813

8.  Structure of an antibacterial peptide ATP-binding cassette transporter in a novel outward occluded state.

Authors:  Hassanul G Choudhury; Zhen Tong; Indran Mathavan; Yanyan Li; So Iwata; Séverine Zirah; Sylvie Rebuffat; Hendrik W van Veen; Konstantinos Beis
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-11       Impact factor: 11.205

9.  Lasso peptides from proteobacteria: Genome mining employing heterologous expression and mass spectrometry.

Authors:  Julian D Hegemann; Marcel Zimmermann; Shaozhou Zhu; Dennis Klug; Mohamed A Marahiel
Journal:  Biopolymers       Date:  2013-09       Impact factor: 2.505

10.  Insights into the biosynthesis and stability of the lasso peptide capistruin.

Authors:  Thomas A Knappe; Uwe Linne; Lars Robbel; Mohamed A Marahiel
Journal:  Chem Biol       Date:  2009-12-24
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  6 in total

1.  Reconstitution and Substrate Specificity of the Thioether-Forming Radical S-Adenosylmethionine Enzyme in Freyrasin Biosynthesis.

Authors:  Timothy W Precord; Nilkamal Mahanta; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-09-09       Impact factor: 5.100

2.  Steric complementarity directs sequence promiscuous leader binding in RiPP biosynthesis.

Authors:  Jonathan R Chekan; Chayanid Ongpipattanakul; Satish K Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-12       Impact factor: 11.205

3.  A Bifunctional Leader Peptidase/ABC Transporter Protein Is Involved in the Maturation of the Lasso Peptide Cochonodin I from Streptococcus suis.

Authors:  Julian D Hegemann; Kevin Jeanne Dit Fouque; Miguel Santos-Fernandez; Francisco Fernandez-Lima
Journal:  J Nat Prod       Date:  2021-10-01       Impact factor: 4.803

Review 4.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

5.  Generation of Lasso Peptide-Based ClpP Binders.

Authors:  Imran T Malik; Julian D Hegemann; Heike Brötz-Oesterhelt
Journal:  Int J Mol Sci       Date:  2021-12-31       Impact factor: 5.923

6.  Reactivity-Based Screening for Citrulline-Containing Natural Products Reveals a Family of Bacterial Peptidyl Arginine Deiminases.

Authors:  Lonnie A Harris; Patricia M B Saint-Vincent; Xiaorui Guo; Graham A Hudson; Adam J DiCaprio; Lingyang Zhu; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2020-11-29       Impact factor: 5.100
  6 in total

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