Literature DB >> 30040216

Mucor circinelloides: Growth, Maintenance, and Genetic Manipulation.

Sandeep Vellanki1, Maria Isabel Navarro-Mendoza2, Alexis Garcia1, Laura Murcia2, Carlos Perez-Arques2, Victoriano Garre2, Francisco E Nicolas2, Soo Chan Lee1.   

Abstract

Mucor circinelloides is a fungus that belongs to the order Mucorales. It grows as mold in the environment and can cause mucormycosis, a potentially fatal infection in immunocompromised patients. M. circinelloides is a biodiesel producer and serves as a model organism for studying several biological processes, such as light responses and RNA interference-mediated gene silencing. Over the past decade, the increasing number of molecular tools has also allowed us to manipulate the genome of this fungus. This article outlines the fundamental protocols for the in vitro growth, maintenance, and genetic manipulation of M. circinelloides in the laboratory. © 2018 by John Wiley & Sons, Inc.
Copyright © 2018 John Wiley & Sons, Inc.

Entities:  

Keywords:  Mucor; Mucor circinelloides; RNAi; gene knockout; mucormycosis

Mesh:

Substances:

Year:  2018        PMID: 30040216      PMCID: PMC6060640          DOI: 10.1002/cpmc.53

Source DB:  PubMed          Journal:  Curr Protoc Microbiol


  38 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data.

Authors:  Joseph W Spatafora; Ying Chang; Gerald L Benny; Katy Lazarus; Matthew E Smith; Mary L Berbee; Gregory Bonito; Nicolas Corradi; Igor Grigoriev; Andrii Gryganskyi; Timothy Y James; Kerry O'Donnell; Robert W Roberson; Thomas N Taylor; Jessie Uehling; Rytas Vilgalys; Merlin M White; Jason E Stajich
Journal:  Mycologia       Date:  2016-09       Impact factor: 2.696

3.  Characterization and control of Mucor circinelloides spoilage in yogurt.

Authors:  Abigail B Snyder; John J Churey; Randy W Worobo
Journal:  Int J Food Microbiol       Date:  2016-04-08       Impact factor: 5.277

4.  Calcineurin orchestrates dimorphic transitions, antifungal drug responses and host-pathogen interactions of the pathogenic mucoralean fungus Mucor circinelloides.

Authors:  Soo Chan Lee; Alicia Li; Silvia Calo; Makoto Inoue; Nam K Tonthat; Judith M Bain; Johanna Louw; Mari L Shinohara; Lars P Erwig; Maria A Schumacher; Dennis C Ko; Joseph Heitman
Journal:  Mol Microbiol       Date:  2015-06-17       Impact factor: 3.501

5.  Construction of a library for sequencing long regions of malarial genomic DNA.

Authors:  E Werner; K Patel; A A Holder
Journal:  Biotechniques       Date:  1997-07       Impact factor: 1.993

6.  Two classes of small antisense RNAs in fungal RNA silencing triggered by non-integrative transgenes.

Authors:  Francisco E Nicolás; Santiago Torres-Martínez; Rosa M Ruiz-Vázquez
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

Review 7.  Fungemia and cutaneous zygomycosis due to Mucor circinelloides in an intensive care unit patient: case report and review of literature.

Authors:  Murat Dizbay; Esra Adisen; Semra Kustimur; Nuran Sari; Bulent Cengiz; Burce Yalcin; Ayse Kalkanci; Ipek Isik Gonul; Takashi Sugita
Journal:  Jpn J Infect Dis       Date:  2009-03       Impact factor: 1.362

8.  Analysis of a food-borne fungal pathogen outbreak: virulence and genome of a Mucor circinelloides isolate from yogurt.

Authors:  Soo Chan Lee; R Blake Billmyre; Alicia Li; Sandra Carson; Sean M Sykes; Eun Young Huh; Piotr Mieczkowski; Dennis C Ko; Christina A Cuomo; Joseph Heitman
Journal:  MBio       Date:  2014-07-08       Impact factor: 7.867

9.  Construction of a Recyclable Genetic Marker and Serial Gene Deletions in the Human Pathogenic Mucorales Mucor circinelloides.

Authors:  Alexis Garcia; Gloria Adedoyin; Joseph Heitman; Soo Chan Lee
Journal:  G3 (Bethesda)       Date:  2017-07-05       Impact factor: 3.154

10.  Selection of reference genes for quantitative real-time RT-PCR assays in different morphological forms of dimorphic zygomycetous fungus Benjaminiella poitrasii.

Authors:  Ejaj K Pathan; Vandana Ghormade; Mukund V Deshpande
Journal:  PLoS One       Date:  2017-06-09       Impact factor: 3.240

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  14 in total

1.  Genetic tools for investigating Mucorales fungal pathogenesis.

Authors:  Alexis Garcia; Sandeep Vellanki; Soo Chan Lee
Journal:  Curr Clin Microbiol Rep       Date:  2018-06-18

2.  Molecular Mechanism of Citrate Efflux by the Mitochondrial Citrate Transporter CT in Filamentous Fungus Mucor circinelloides WJ11.

Authors:  Wu Yang; Shiqi Dong; Junhuan Yang; Hassan Mohamed; Aabid Manzoor Shah; Yusuf Nazir; Xiuzhen Gao; Huirong Fan; Yuanda Song
Journal:  Front Microbiol       Date:  2021-05-14       Impact factor: 5.640

3.  Mass spore production of Mucor circinelloides on rice.

Authors:  J Alberto Patiño-Medina; Viridiana Alejandre-Castañeda; Marco I Valle-Maldonado; Javier Villegas; Martha I Ramírez-Díaz; Rafael Ortiz-Alvarado; Víctor Meza-Carmen
Journal:  3 Biotech       Date:  2021-06-04       Impact factor: 2.893

Review 4.  Mucorales Species and Macrophages.

Authors:  Francisco E Nicolás; Laura Murcia; Eusebio Navarro; María Isabel Navarro-Mendoza; Carlos Pérez-Arques; Victoriano Garre
Journal:  J Fungi (Basel)       Date:  2020-06-26

5.  Mucor circinelloides Thrives inside the Phagosome through an Atf-Mediated Germination Pathway.

Authors:  Carlos Pérez-Arques; María Isabel Navarro-Mendoza; Laura Murcia; Carlos Lax; Pablo Martínez-García; Joseph Heitman; Francisco E Nicolás; Victoriano Garre
Journal:  mBio       Date:  2019-02-05       Impact factor: 7.867

6.  A Novel Resistance Pathway for Calcineurin Inhibitors in the Human-Pathogenic Mucorales Mucor circinelloides.

Authors:  Sandeep Vellanki; R Blake Billmyre; Alejandra Lorenzen; Micaela Campbell; Broderick Turner; Eun Young Huh; Joseph Heitman; Soo Chan Lee
Journal:  mBio       Date:  2020-01-28       Impact factor: 7.867

7.  Characterization of Three Pleiotropic Drug Resistance Transporter Genes and Their Participation in the Azole Resistance of Mucor circinelloides.

Authors:  Gábor Nagy; Sándor Kiss; Rakesh Varghese; Kitti Bauer; Csilla Szebenyi; Sándor Kocsubé; Mónika Homa; László Bodai; Nóra Zsindely; Gábor Nagy; Csaba Vágvölgyi; Tamás Papp
Journal:  Front Cell Infect Microbiol       Date:  2021-04-14       Impact factor: 5.293

8.  Role of Snf-β in lipid accumulation in the high lipid-producing fungus Mucor circinelloides WJ11.

Authors:  Shaista Nosheen; Tahira Naz; Junhuan Yang; Syed Ammar Hussain; Abu Bakr Ahmad Fazili; Yusuf Nazir; Shaoqi Li; Hassan Mohamed; Wu Yang; Kiren Mustafa; Yuanda Song
Journal:  Microb Cell Fact       Date:  2021-02-27       Impact factor: 5.328

Review 9.  Interactions of FK506 and Rapamycin With FK506 Binding Protein 12 in Opportunistic Human Fungal Pathogens.

Authors:  Sandeep Vellanki; Alexis E Garcia; Soo Chan Lee
Journal:  Front Mol Biosci       Date:  2020-10-16

10.  Increased Accumulation of Medium-Chain Fatty Acids by Dynamic Degradation of Long-Chain Fatty Acids in Mucor circinelloides.

Authors:  Syed Ammar Hussain; Alexis Garcia; Md Ahsanul Kabir Khan; Shaista Nosheen; Yao Zhang; Mattheos A G Koffas; Victoriano Garre; Soo Chan Lee; Yuanda Song
Journal:  Genes (Basel)       Date:  2020-08-05       Impact factor: 4.096

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