Literature DB >> 30040104

Engineering cell heterogeneity into organs-on-a-chip.

David R Mertz1, Tasdiq Ahmed, Shuichi Takayama.   

Abstract

Organ-on-a-chip development is an application that will benefit from advances in cell heterogeneity characterization because these culture models are intended to mimic in vivo microenvironments, which are complex and dynamic. Due in no small part to advances in microfluidic single cell analysis methods, cell-to-cell variability is an increasingly understood feature of physiological tissues, with cell types from as common as 1 out of every 2 cells to as rare as 1 out of every 100 000 cells having important roles in the biochemical and biological makeup of tissues and organs. Variability between neighboring cells can be transient or maintained, and ordered or stochastic. This review covers three areas of well-studied cell heterogeneity that are informative for organ-on-a-chip development efforts: tumors, the lung, and the intestine. Then we look at how recent single cell analysis strategies have enabled better understanding of heterogeneity within in vitro and in vivo tissues. Finally, we provide a few work-arounds for adapting current on-chip culture methods to better mimic physiological cell heterogeneity including accounting for crucial rare cell types and events.

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Year:  2018        PMID: 30040104      PMCID: PMC6081245          DOI: 10.1039/c8lc00413g

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  141 in total

1.  Building an experimental model of the human body with non-physiological parameters.

Authors:  Joseph M Labuz; Christopher Moraes; David R Mertz; Brendan M Leung; Shuichi Takayama
Journal:  Technology (Singap World Sci)       Date:  2017-03-31

2.  Bmi1 is expressed in vivo in intestinal stem cells.

Authors:  Eugenio Sangiorgi; Mario R Capecchi
Journal:  Nat Genet       Date:  2008-06-08       Impact factor: 38.330

3.  Identification of cells initiating human melanomas.

Authors:  Tobias Schatton; George F Murphy; Natasha Y Frank; Kazuhiro Yamaura; Ana Maria Waaga-Gasser; Martin Gasser; Qian Zhan; Stefan Jordan; Lyn M Duncan; Carsten Weishaupt; Robert C Fuhlbrigge; Thomas S Kupper; Mohamed H Sayegh; Markus H Frank
Journal:  Nature       Date:  2008-01-17       Impact factor: 49.962

Review 4.  Tumor heterogeneity: causes and consequences.

Authors:  Andriy Marusyk; Kornelia Polyak
Journal:  Biochim Biophys Acta       Date:  2009-11-18

5.  Lineage tracing reveals Lgr5+ stem cell activity in mouse intestinal adenomas.

Authors:  Arnout G Schepers; Hugo J Snippert; Daniel E Stange; Maaike van den Born; Johan H van Es; Marc van de Wetering; Hans Clevers
Journal:  Science       Date:  2012-08-01       Impact factor: 47.728

6.  A human disease model of drug toxicity-induced pulmonary edema in a lung-on-a-chip microdevice.

Authors:  Dongeun Huh; Daniel C Leslie; Benjamin D Matthews; Jacob P Fraser; Samuel Jurek; Geraldine A Hamilton; Kevin S Thorneloe; Michael Allen McAlexander; Donald E Ingber
Journal:  Sci Transl Med       Date:  2012-11-07       Impact factor: 17.956

7.  A Colorectal Tumor Organoid Library Demonstrates Progressive Loss of Niche Factor Requirements during Tumorigenesis.

Authors:  Masayuki Fujii; Mariko Shimokawa; Shoichi Date; Ai Takano; Mami Matano; Kosaku Nanki; Yuki Ohta; Kohta Toshimitsu; Yoshihiro Nakazato; Kenta Kawasaki; Toshio Uraoka; Toshiaki Watanabe; Takanori Kanai; Toshiro Sato
Journal:  Cell Stem Cell       Date:  2016-05-19       Impact factor: 24.633

8.  Phenotypic characterization of human colorectal cancer stem cells.

Authors:  Piero Dalerba; Scott J Dylla; In-Kyung Park; Rui Liu; Xinhao Wang; Robert W Cho; Timothy Hoey; Austin Gurney; Emina H Huang; Diane M Simeone; Andrew A Shelton; Giorgio Parmiani; Chiara Castelli; Michael F Clarke
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-04       Impact factor: 11.205

9.  Intratumor heterogeneity and branched evolution revealed by multiregion sequencing.

Authors:  Marco Gerlinger; Andrew J Rowan; Stuart Horswell; James Larkin; David Endesfelder; Eva Gronroos; Pierre Martinez; Nicholas Matthews; Aengus Stewart; Charles Swanton; M Math; Patrick Tarpey; Ignacio Varela; Benjamin Phillimore; Sharmin Begum; Neil Q McDonald; Adam Butler; David Jones; Keiran Raine; Calli Latimer; Claudio R Santos; Mahrokh Nohadani; Aron C Eklund; Bradley Spencer-Dene; Graham Clark; Lisa Pickering; Gordon Stamp; Martin Gore; Zoltan Szallasi; Julian Downward; P Andrew Futreal
Journal:  N Engl J Med       Date:  2012-03-08       Impact factor: 91.245

Review 10.  Alveolar macrophages: plasticity in a tissue-specific context.

Authors:  Tracy Hussell; Thomas J Bell
Journal:  Nat Rev Immunol       Date:  2014-01-21       Impact factor: 53.106

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  11 in total

Review 1.  Organ-on-a-chip engineering: Toward bridging the gap between lab and industry.

Authors:  Qasem Ramadan; Mohammed Zourob
Journal:  Biomicrofluidics       Date:  2020-07-14       Impact factor: 2.800

Review 2.  Biofabrication of phenotypic pulmonary fibrosis assays.

Authors:  Cameron Yamanishi; Stephen Robinson; Shuichi Takayama
Journal:  Biofabrication       Date:  2019-06-19       Impact factor: 9.954

Review 3.  What Can an Organ-on-a-Chip Teach Us About Human Lung Pathophysiology?

Authors:  Haiqing Bai; Donald E Ingber
Journal:  Physiology (Bethesda)       Date:  2022-06-06

Review 4.  Studying Adipose Tissue in the Breast Tumor Microenvironment In Vitro: Progress and Opportunities.

Authors:  David Mertz; Jason Sentosa; Gary Luker; Shuichi Takayama
Journal:  Tissue Eng Regen Med       Date:  2020-09-16       Impact factor: 4.169

Review 5.  Airway-On-A-Chip: Designs and Applications for Lung Repair and Disease.

Authors:  Tanya J Bennet; Avineet Randhawa; Jessica Hua; Karen C Cheung
Journal:  Cells       Date:  2021-06-26       Impact factor: 6.600

6.  An engineered pancreatic cancer model with intra-tumoral heterogeneity of driver mutations.

Authors:  Hye-Ran Moon; Altug Ozcelikkale; Yi Yang; Bennett D Elzey; Stephen F Konieczny; Bumsoo Han
Journal:  Lab Chip       Date:  2020-09-10       Impact factor: 7.517

Review 7.  Microphysiological systems modeling acute respiratory distress syndrome that capture mechanical force-induced injury-inflammation-repair.

Authors:  Hannah Viola; Jonathan Chang; Jocelyn R Grunwell; Louise Hecker; Rabindra Tirouvanziam; James B Grotberg; Shuichi Takayama
Journal:  APL Bioeng       Date:  2019-11-22

Review 8.  Precision Oncology Beyond Genomics: The Future Is Here-It Is Just Not Evenly Distributed.

Authors:  Ulrike Pfohl; Alina Pflaume; Manuela Regenbrecht; Sabine Finkler; Quirin Graf Adelmann; Christoph Reinhard; Christian R A Regenbrecht; Lena Wedeken
Journal:  Cells       Date:  2021-04-17       Impact factor: 6.600

Review 9.  Organ-On-A-Chip: A Survey of Technical Results and Problems.

Authors:  Alex Ede Danku; Eva-H Dulf; Cornelia Braicu; Ancuta Jurj; Ioana Berindan-Neagoe
Journal:  Front Bioeng Biotechnol       Date:  2022-02-10

Review 10.  3D Lung Tissue Models for Studies on SARS-CoV-2 Pathophysiology and Therapeutics.

Authors:  Roberto Plebani; Haiqing Bai; Longlong Si; Jing Li; Chunhe Zhang; Mario Romano
Journal:  Int J Mol Sci       Date:  2022-09-03       Impact factor: 6.208

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