Literature DB >> 30039968

N-oxide Derivatives: Car-Parrinello Molecular Dynamics and Electron Localization Function Study on Intramolecular Hydrogen Bonds.

Jarosław J Panek1, Aneta Jezierska1.   

Abstract

First-principle molecular dynamics simulations (CPMD) and electron localization function (ELF) topological analysis were performed for two N-oxides, 2-[( N, N-dimethylamino- N-oxy)methyl]-4,6-dimethylphenol (I) and 5,5'-dibromo-3-[(diethylamino)methyl]-2,2'-biphenol N-oxide (II). Special attention was paid to hydrogen bond dynamics and spectroscopic features. Simulations were carried out in vacuo and in the crystalline phase. It was found that for compound I proton transfer phenomena do not occur spontaneously. An opposite situation was noticed for one of the two intramolecular hydrogen bonds of compound II. The influence of the neighboring molecules (including microsolvation) and the crystal field on the hydrogen bond properties cannot be neglected. Hydrogen bond spectroscopic signatures were quite well reproduced by power spectra of atomic velocity. Metric and spectroscopic theoretical findings were compared with experimental data available, especially in a view of the fact that experimental X-ray diffraction and FT-IR data of compound II indicate strong delocalization of the N-oxide bridge proton. ELF analysis showed that for compound II the N-oxide bridge belongs to the topological category of strong hydrogen bonds with the separate ELF basin for the bridged hydrogen atom.

Entities:  

Year:  2018        PMID: 30039968     DOI: 10.1021/acs.jpca.8b02970

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  3 in total

1.  Modeling of Solute-Solvent Interactions Using an External Electric Field-From Tautomeric Equilibrium in Nonpolar Solvents to the Dissociation of Alkali Metal Halides.

Authors:  Ilya G Shenderovich; Gleb S Denisov
Journal:  Molecules       Date:  2021-02-26       Impact factor: 4.411

2.  Exploring Intra- and Intermolecular Interactions in Selected N-Oxides-The Role of Hydrogen Bonds.

Authors:  Aneta Jezierska; Jarosław J Panek; Kacper Błaziak; Kamil Raczyński; Aleksander Koll
Journal:  Molecules       Date:  2022-01-25       Impact factor: 4.411

3.  Sensitivity of Intra- and Intermolecular Interactions of Benzo[h]quinoline from Car-Parrinello Molecular Dynamics and Electronic Structure Inspection.

Authors:  Jarosław J Panek; Joanna Zasada; Bartłomiej M Szyja; Beata Kizior; Aneta Jezierska
Journal:  Int J Mol Sci       Date:  2021-05-14       Impact factor: 5.923

  3 in total

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