| Literature DB >> 30035638 |
Mark A Sephton1, Jack Hunter Waite2, Tim G Brockwell2.
Abstract
The icy moons of the outer Solar System present the possibility of subsurface water, habitable conditions, and potential abodes for life. Access to evidence that reveals the presence of life on the icy moons can be facilitated by plumes that eject material from the subsurface out into space. One instrument capable of performing life-search investigations at the icy moons is the MAss SPectrometer for Planetary EXploration/Europa (MASPEX), which constitutes a high-resolution, high-sensitivity multibounce time-of-flight mass spectrometer capable of measuring trace amounts (ppb) of organic compounds. MASPEX has been selected for the NASA Europa Clipper mission and will sample any plumes and the surface-sputtered atmosphere to assess any evidence for habitability and life. MASPEX is capable of similar investigations targeted at other icy moons. Data may be forthcoming from direct sampling but also impact dissociation because of the high speed of some analytes. Impact dissociation is analogous to the dissociation provided by modern analytical pyrolysis methods. Radiolytic dissociation on the europan surface before or during the sputtering process can also induce fragmentation similar to pyrolysis. In this study, we have compiled pyrolysis mass spectrometry data from a variety of biological and nonbiological materials to demonstrate the ability of MASPEX to recognize habitability and detect life in any plumes and atmospheres of icy moons. Key Words: Europa-Icy moons-Life detection-Mass spectrometry-Organic matter. Astrobiology 18, 843-855.Entities:
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Year: 2018 PMID: 30035638 PMCID: PMC6067095 DOI: 10.1089/ast.2017.1656
Source DB: PubMed Journal: Astrobiology ISSN: 1557-8070 Impact factor: 4.335
Common Biological (Fossil) and Nonbiological Organic Compounds and Their Characteristic Fragment Ions Expressed as Integers
| Chains and rings | |||
| Straight chains | Alkanoic acids | 60, 73, 87, 101, etc. | Important membrane lipids in bacteria and eukarya. Energy store compounds. Specificity of longer chains (fatty acids) commonly reflects biosynthesis. |
| Alkanes | 29, 43, 57, 71, 85, 99, 113, 127, 141, etc. | Decarboxylation products of fatty acids. Thermal product of aliphatic biopolymers. Specificity of longer chains commonly reflects biosynthesis. | |
| Alkenes | 27, 41, 55, 69, 83, 97, 111, 125, 139, etc. | Characteristic products of rapid (analytical) fragmentation of aliphatic polymer. Specificity of longer chains reflects biosynthesis. | |
| Structurally highly specific | Isoprenoidal alkanes | 29, 43, 57, 71, 85, 99, 113, 127, 141, etc. | Important membrane lipids in archaea. Elevated ion abundance at branch point ( |
| Terpenoids | 191, 217 | Important membrane lipids for bacteria (hopanoids, | |
| Heteroatomic | |||
| Oxygen containing | Polyols ( | Sugar-related compounds. Important energy stores for all organisms. | |
| Nitrogen containing | Amines | 30, 44, 58, 72, 86, 100, etc. | Amines make up part of the structure of amino acids. Essential components for proteins and enzymes. |
| Sulfur containing | Alkylthiophenes | 45, 57, 58, 69, 71, 83–85, 97, 98, 109, 110, 111, 112, etc. | Diagenesis adds sulfur to any double bonds present. |
| Aromatic | Alkylbenzenes | 78, 91, 92, 105, 106, 119, 120, 133, 134, etc. | Aromatic compounds are common products of thermal metamorphism of pre-existing organic matter. Aromatic compounds are also common in meteorites. |
| Alkylnaphthalenes | 128, 141, 142, 155, 156, etc. | ||
| Alkylbenzothiophenes | 134, 147, 148, 161, 162, etc. | ||
| Alkylphenols | 77, 91, 94, 107, 108, 121, 122, etc. | ||
| Polycyclic aromatic hydrocarbons | 128, 152, 154, 166, 178, 202, 228, 252, 276, 278, etc. | PAH are not synthesized by biology. They are found in meteorites, partial combustion products, and metamorphosed organic matter. | |
PAH = polycyclic aromatic hydrocarbons.

Mass spectrum of the products from pyrolysis of Blue Lias marine shale at 600°C.

Mass spectrum of the products from pyrolysis of (a) low-volatile bituminous coal and (b) charcoalified wood at 600°C.

Mass spectrum of the products from pyrolysis of a fossil soil at 600°C.

Mass spectrum of the products from pyrolysis of the (a) Orgueil (CI1), (b) Murchison (CM2), and (c) Allende (CV3) carbonaceous meteorites at 650°C.
Substituted Benzenes Listed in Their Elution Order on a Nonpolar Chromatography Column Alongside Molecular Weights and Characteristic Ions with Percentages in Parentheses (Sephton,
| Ethylbenzene | 106 | 91 (44), 105 (3), 106 (14) |
| 1,3-dimethylbenzene (meta-) | 106 | 91 (32), 105 (9), 106 (21) |
| 1,4-dimethylbenzene (para-) | 106 | 91 (33), 105 (10), 106 (21) |
| 1,2-dimethylbenzene (ortho-) | 106 | 91 (35), 105 (6), 106 (14) |
| Styrene | 104 | 78 (12), 103 (15), 104 (36) |
| Isopropylbenzene | 120 | 91 (3), 105 (49), 120 (13) |
| n-Propylbenzene | 120 | 91 (65), 105 (2), 120 (13) |
| 1-methyl-3-ethylbenzene | 120 | 91 (5), 105 (43), 120 (14) |
| 1-methyl-4-ethylbenzene | 120 | 91 (5), 105 (46), 120 (13) |
| 1,3,5-trimethylbenzene | 120 | 105 (35), 119 (5), 120 (21) |
| 1-methyl-2-ethylbenzene | 120 | 91 (5), 105 (46), 120 (14) |
| 1,2,4-trimethylbenzene | 120 | 105 (38), 119 (5), 120 (19) |
| 1,2,3-trimethylbenzene | 120 | 105 (40), 119 (5), 120 (19) |
Relative Abundances or Responses of Dimethylbenzene Isomers Associated with Various Formation and Modification Mechanisms
| Space and laboratory processes | |||||
| High temperature (500°C) | Stellar atmosphere | 5 | 3 | 1 | 8 |
| High temperature (800°C) | Stellar atmosphere | 4 | 2 | 2 | 3 |
| Ion-molecule reaction | Molecular cloud | 6 | 2 | 2 | 4 |
| Radiation resistance | Grain mantle | High | Med | Low | High |
| Fischer–Tropsch | Solar nebula | 10.4 | 2.8 | 3.7 | |
| Degradation resistance | Parent body | Med | High | Low | Med |
| Catalytic cyclization | Earth laboratory | 27 | 7 | 33 | 1 |
| Terrestrial biosphere | |||||
| Blue Lias (type I kerogen) | Earth biosphere | 2 | 1 | 2 | |
| Low-volatile bituminous coal (type III kerogen) | Earth biosphere | 27 | 10 | 2.7 | |
| Charcoal (type IV kerogen) | Earth biosphere | 19 | 5 | 3.8 | |
Space and laboratory data from Sephton (2013) and references therein; biological data from samples used in this study.

The different types of organic matter in carbonaceous meteorites. Each type of organic matter responds differently to pyrolysis and the relative abundances of the three fractions can reflect preterrestrial aqueous and thermal processing, after (Sephton et al., 2003). FOM, free organic matter; LOM, labile organic matter; ROM, refractory organic matter. (a) all fractions are present in the whole rock meteorite, (b) FOM can be removed by solvent extraction, (c) LOM can be partly or completely removed by aqueous and/or thermal processing.
Probability Calculations for Organic Detection in Icy Moon Samples with Varying True Positive Rates and True Negative Rates and Different Associated Positive Likelihood Ratios
| Organic compounds | ||||||
| True positive rate = true positives/(true positives + false negatives) | 0.99 | 0.95 | 0.90 | 0.75 | 0.60 | 0.50 |
| True negative rate = true negatives/(true negatives + false positives) | 0.99 | 0.95 | 0.90 | 0.75 | 0.60 | 0.50 |
| Positive likelihood ratio = true positive rate/(1 − true negative rate) | 99.0 | 19.00 | 9.00 | 3.00 | 1.50 | 1.00 |
| Premeasurement probability (fraction of particles with the analyte) | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 | 0.25 |
| Premeasurement odds = probability/(1 – probability) | 0.33 | 0.33 | 0.33 | 0.33 | 0.33 | 0.33 |
| Postmeasurement odds = premeasurement odds × likelihood ratio | 33.0 | 6.33 | 3.00 | 1.00 | 0.50 | 0.33 |
| Postmeasurement probability = odds/(1 + odds) | 0.97 | 0.86 | 0.75 | 0.50 | 0.33 | 0.25 |
| Postmeasurement probability (%) | 97 | 86 | 75 | 50 | 33 | 25 |
| Complex >200 amu organic matter | ||||||
| True positive rate = true positives/(true positives + false negatives) | 0.99 | 0.95 | 0.90 | 0.75 | 0.60 | 0.50 |
| True negative rate = true negatives/(true negatives + false positives) | 0.99 | 0.95 | 0.90 | 0.75 | 0.60 | 0.50 |
| Positive likelihood ratio = true positive rate/(1 − true negative rate) | 99.0 | 19.0 | 9.00 | 3.00 | 1.50 | 1.00 |
| Premeasurement probability (fraction of particles with the analyte) | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 |
| Premeasurement odds = probability/(1 − probability) | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 |
| Postmeasurement odds = premeasurement odds × likelihood ratio | 3.06 | 0.59 | 0.28 | 0.09 | 0.05 | 0.03 |
| Postmeasurement probability = odds/(1 + odds) | 0.75 | 0.37 | 0.22 | 0.08 | 0.04 | 0.03 |
| Postmeasurement probability (%) | 75 | 37 | 22 | 8 | 4 | 3 |
Single measurements are likely in the icy moon environment; so very high positive likelihood ratios will provide the best certainty of detection.
LHR = likelihood ratio; TNR = true negative ratio; TPR = true positive ratio.