Literature DB >> 30032705

A framework for meta-analysis of prediction model studies with binary and time-to-event outcomes.

Thomas Pa Debray1,2, Johanna Aag Damen1,2, Richard D Riley3, Kym Snell3, Johannes B Reitsma1,2, Lotty Hooft1,2, Gary S Collins4, Karel Gm Moons1,2.   

Abstract

It is widely recommended that any developed-diagnostic or prognostic-prediction model is externally validated in terms of its predictive performance measured by calibration and discrimination. When multiple validations have been performed, a systematic review followed by a formal meta-analysis helps to summarize overall performance across multiple settings, and reveals under which circumstances the model performs suboptimal (alternative poorer) and may need adjustment. We discuss how to undertake meta-analysis of the performance of prediction models with either a binary or a time-to-event outcome. We address how to deal with incomplete availability of study-specific results (performance estimates and their precision), and how to produce summary estimates of the c-statistic, the observed:expected ratio and the calibration slope. Furthermore, we discuss the implementation of frequentist and Bayesian meta-analysis methods, and propose novel empirically-based prior distributions to improve estimation of between-study heterogeneity in small samples. Finally, we illustrate all methods using two examples: meta-analysis of the predictive performance of EuroSCORE II and of the Framingham Risk Score. All examples and meta-analysis models have been implemented in our newly developed R package "metamisc".

Entities:  

Keywords:  Meta-analysis; aggregate data; calibration; discrimination; evidence synthesis; prediction; prognosis; systematic review; validation

Year:  2018        PMID: 30032705      PMCID: PMC6728752          DOI: 10.1177/0962280218785504

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  54 in total

1.  A new measure of prognostic separation in survival data.

Authors:  Patrick Royston; Willi Sauerbrei
Journal:  Stat Med       Date:  2004-03-15       Impact factor: 2.373

2.  EuroSCORE II.

Authors:  Samer A M Nashef; François Roques; Linda D Sharples; Johan Nilsson; Christopher Smith; Antony R Goldstone; Ulf Lockowandt
Journal:  Eur J Cardiothorac Surg       Date:  2012-02-29       Impact factor: 4.191

3.  Confidence intervals for an effect size measure based on the Mann-Whitney statistic. Part 2: asymptotic methods and evaluation.

Authors:  Robert G Newcombe
Journal:  Stat Med       Date:  2006-02-28       Impact factor: 2.373

4.  Prognosis and prognostic research: what, why, and how?

Authors:  Karel G M Moons; Patrick Royston; Yvonne Vergouwe; Diederick E Grobbee; Douglas G Altman
Journal:  BMJ       Date:  2009-02-23

5.  Prediction of coronary heart disease using risk factor categories.

Authors:  P W Wilson; R B D'Agostino; D Levy; A M Belanger; H Silbershatz; W B Kannel
Journal:  Circulation       Date:  1998-05-12       Impact factor: 29.690

6.  Meta-analysis in clinical trials.

Authors:  R DerSimonian; N Laird
Journal:  Control Clin Trials       Date:  1986-09

7.  Covariate-adjusted measures of discrimination for survival data.

Authors:  Ian R White; Eleni Rapsomaniki
Journal:  Biom J       Date:  2014-12-20       Impact factor: 2.207

8.  Meta-analysis of prediction model performance across multiple studies: Which scale helps ensure between-study normality for the C-statistic and calibration measures?

Authors:  Kym Ie Snell; Joie Ensor; Thomas Pa Debray; Karel Gm Moons; Richard D Riley
Journal:  Stat Methods Med Res       Date:  2017-05-08       Impact factor: 3.021

9.  Assessing Discriminative Performance at External Validation of Clinical Prediction Models.

Authors:  Daan Nieboer; Tjeerd van der Ploeg; Ewout W Steyerberg
Journal:  PLoS One       Date:  2016-02-16       Impact factor: 3.240

10.  Methods to estimate the between-study variance and its uncertainty in meta-analysis.

Authors:  Areti Angeliki Veroniki; Dan Jackson; Wolfgang Viechtbauer; Ralf Bender; Jack Bowden; Guido Knapp; Oliver Kuss; Julian P T Higgins; Dean Langan; Georgia Salanti
Journal:  Res Synth Methods       Date:  2015-09-02       Impact factor: 5.273

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  24 in total

Review 1.  Prognostic Models in Severe Traumatic Brain Injury: A Systematic Review and Meta-analysis.

Authors:  Rita de Cássia Almeida Vieira; Juliana Cristina Pereira Silveira; Wellingson Silva Paiva; Daniel Vieira de Oliveira; Camila Pedroso Estevam de Souza; Eduesley Santana-Santos; Regina Marcia Cardoso de Sousa
Journal:  Neurocrit Care       Date:  2022-08-09       Impact factor: 3.532

2.  Prognostic models for outcome prediction in patients with advanced hepatocellular carcinoma treated by systemic therapy: a systematic review and critical appraisal.

Authors:  Li Li; Xiaomi Li; Wendong Li; Jinglong Chen; Wei Li; Xiaoyan Ding; Yongchao Zhang
Journal:  BMC Cancer       Date:  2022-07-09       Impact factor: 4.638

3.  Prognostic models for predicting relapse or recurrence of major depressive disorder in adults.

Authors:  Andrew S Moriarty; Nicholas Meader; Kym Ie Snell; Richard D Riley; Lewis W Paton; Carolyn A Chew-Graham; Simon Gilbody; Rachel Churchill; Robert S Phillips; Shehzad Ali; Dean McMillan
Journal:  Cochrane Database Syst Rev       Date:  2021-05-06

4.  Comparing Machine Learning Models and Statistical Models for Predicting Heart Failure Events: A Systematic Review and Meta-Analysis.

Authors:  Zhoujian Sun; Wei Dong; Hanrui Shi; Hong Ma; Lechao Cheng; Zhengxing Huang
Journal:  Front Cardiovasc Med       Date:  2022-04-06

5.  Cardiovascular risk prediction models for women in the general population: A systematic review.

Authors:  Sara J Baart; Veerle Dam; Luuk J J Scheres; Johanna A A G Damen; René Spijker; Ewoud Schuit; Thomas P A Debray; Bart C J M Fauser; Eric Boersma; Karel G M Moons; Yvonne T van der Schouw
Journal:  PLoS One       Date:  2019-01-08       Impact factor: 3.240

Review 6.  Methodological standards for the development and evaluation of clinical prediction rules: a review of the literature.

Authors:  Laura E Cowley; Daniel M Farewell; Sabine Maguire; Alison M Kemp
Journal:  Diagn Progn Res       Date:  2019-08-22

7.  Analyzing the Job Demands-Control-Support Model in Work-Life Balance: A Study among Nurses in the European Context.

Authors:  Virginia Navajas-Romero; Antonio Ariza-Montes; Felipe Hernández-Perlines
Journal:  Int J Environ Res Public Health       Date:  2020-04-21       Impact factor: 3.390

8.  Prediction of incident atrial fibrillation in community-based electronic health records: a systematic review with meta-analysis.

Authors:  Ramesh Nadarajah; Eman Alsaeed; Ben Hurdus; Suleman Aktaa; David Hogg; Matthew G D Bates; Campbel Cowan; Jianhua Wu; Chris P Gale
Journal:  Heart       Date:  2022-06-10       Impact factor: 7.365

9.  Prognostic models for newly-diagnosed chronic lymphocytic leukaemia in adults: a systematic review and meta-analysis.

Authors:  Nina Kreuzberger; Johanna Aag Damen; Marialena Trivella; Lise J Estcourt; Angela Aldin; Lisa Umlauff; Maria Dla Vazquez-Montes; Robert Wolff; Karel Gm Moons; Ina Monsef; Farid Foroutan; Karl-Anton Kreuzer; Nicole Skoetz
Journal:  Cochrane Database Syst Rev       Date:  2020-07-31

10.  Prognostic models for outcome prediction in patients with chronic obstructive pulmonary disease: systematic review and critical appraisal.

Authors:  Vanesa Bellou; Lazaros Belbasis; Athanasios K Konstantinidis; Ioanna Tzoulaki; Evangelos Evangelou
Journal:  BMJ       Date:  2019-10-04
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