Literature DB >> 3003236

Cloning and sequencing of 5' terminal sequences from avian infectious bronchitis virus genomic RNA.

T D Brown, M E Boursnell, M M Binns, F M Tomley.   

Abstract

The subgenomic RNAs of the fowl coronavirus infectious bronchitis virus (IBV) form a 3' co-terminal or 'nested' set. The presence of non-contiguous (leader) sequences fused to the 5' termini of murine hepatitis virus mRNAs has been demonstrated using RNase T1 oligonucleotide mapping and sequencing. The presence of a leader sequence on IBV mRNA A has been demonstrated previously. In this paper the presence of a leader identical to that present on the 5' terminus of IBV mRNA A is demonstrated to be present on the 5' terminus of IBV genomic RNA. This has been achieved by sequencing of primer extension products and cDNA clones containing the genomic leader. Analysis of these clones has revealed the presence of a sequence at the leader/genome-length RNA junction which is closely related to regions of homology identified previously within the genomic RNA sequence at the leader/body junctions of subgenomic RNAs. The implications of this finding for mechanisms of coronavirus RNA synthesis are discussed.

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Year:  1986        PMID: 3003236     DOI: 10.1099/0022-1317-67-2-221

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  13 in total

1.  Identification of a domain required for autoproteolytic cleavage of murine coronavirus gene A polyprotein.

Authors:  S C Baker; C K Shieh; L H Soe; M F Chang; D M Vannier; M M Lai
Journal:  J Virol       Date:  1989-09       Impact factor: 5.103

2.  Coronavirus subgenomic minus-strand RNAs and the potential for mRNA replicons.

Authors:  P B Sethna; S L Hung; D A Brian
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

3.  Sequence and translation of the murine coronavirus 5'-end genomic RNA reveals the N-terminal structure of the putative RNA polymerase.

Authors:  L H Soe; C K Shieh; S C Baker; M F Chang; M M Lai
Journal:  J Virol       Date:  1987-12       Impact factor: 5.103

4.  A translation-attenuating intraleader open reading frame is selected on coronavirus mRNAs during persistent infection.

Authors:  M A Hofmann; S D Senanayake; D A Brian
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

5.  Mutagenic analysis of the coronavirus intergenic consensus sequence.

Authors:  M Joo; S Makino
Journal:  J Virol       Date:  1992-11       Impact factor: 5.103

6.  The nucleotide sequence of the extreme 5' end of the avian coronavirus genome; implications for the discontinuous mRNA synthesis.

Authors:  P J Bredenbeek; J F Noten; J A Lenstra; M C Horzinek; B A van der Zeijst; W J Spaan
Journal:  Nucleic Acids Res       Date:  1986-10-10       Impact factor: 16.971

7.  Differential premature termination of transcription as a proposed mechanism for the regulation of coronavirus gene expression.

Authors:  D A Konings; P J Bredenbeek; J F Noten; P Hogeweg; W J Spaan
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

8.  Comparative Analysis of Gene Expression in Virulent and Attenuated Strains of Infectious Bronchitis Virus at Subcodon Resolution.

Authors:  Adam M Dinan; Sarah Keep; Erica Bickerton; Paul Britton; Andrew E Firth; Ian Brierley
Journal:  J Virol       Date:  2019-08-28       Impact factor: 6.549

9.  Enteric coronavirus TGEV: partial sequence of the genomic RNA, its organization and expression.

Authors:  D Rasschaert; J Gelfi; H Laude
Journal:  Biochimie       Date:  1987 Jun-Jul       Impact factor: 4.079

10.  The 5'-end sequence of the murine coronavirus genome: implications for multiple fusion sites in leader-primed transcription.

Authors:  C K Shieh; L H Soe; S Makino; M F Chang; S A Stohlman; M M Lai
Journal:  Virology       Date:  1987-02       Impact factor: 3.616

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