| Literature DB >> 30031378 |
Marek Lalli1, Matthew Hamilton2, Carel Pretorius2, Debora Pedrazzoli3, Richard G White3, Rein M G J Houben3.
Abstract
BACKGROUND: Increasing case notifications is one of the top programmatic priorities of National TB Control Programmes (NTPs). To find more cases, NTPs often need to consider expanding TB case-detection activities to populations with increasingly low prevalence of disease. Together with low-specificity diagnostic algorithms, these strategies can lead to an increasingly high number of false positive diagnoses, which has important adverse consequences.Entities:
Keywords: False positive diagnosis; Mathematical modelling; Screening; Tuberculosis
Mesh:
Year: 2018 PMID: 30031378 PMCID: PMC6054844 DOI: 10.1186/s12879-018-3239-x
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Net sensitivity and specificity of diagnostic algorithms reflected in each scenario, by smear type. Green cells represent large increase in value compared to baseline algorithm
| Scenario | Definition | Net sensitivity | Net specificity | ||
|---|---|---|---|---|---|
| Smear positive | Smear negative | ||||
| Baseline | Prolonged cough & microscopy/clinical diagnosis | 50.0% | 20.9% | 94.9% | |
| Scenario 1 | Algorithm A | Prolonged cough & GeneXpert | 49.1% | 27.8%* | 99.9%* |
| Algorithm B | Any symptom & microscopy/clinical diagnosis | 77.0%* | 20.9% | 94.3% | |
| Scenario 2 | Microscopy (baseline) | Prolonged cough & microscopy/clinical diagnosis | 50.0% | 20.9% | 94.9% |
| GeneXpert | Prolonged cough & GeneXpert | 49.1% | 27.8%* | 99.9%* | |
*Asterisk signifies large increase in value compared to baseline algorithm; Scenario 1 comparing the impact of two different diagnostic algorithms in a defined population; Scenario 2 examining the impact of expanding case detection towards population of lower disease
Fig. 1Care cascade for baseline projection in 2017
Fig. 2Additional notifications between 2017 and 2025 based on diagnostic algorithm
Fig. 3Additional notifications between 2017 and 2025 of ICF activities based on diagnostic test
Modelled outcomes between 2017 and 2025 for each scenario
| Scenario | Additional notifications between 2017 and 2025 (absolute numbers, × 1000) | Number of cases averted between 2017 and 2025 (× 1000) | Percent reduction in incidence by 2025 compared to 2017 | Absolute change in PPV by 2025 compared to baseline | Number of additional FP notifications per additional TP notification | Number of additional notifications needed to avert one case | |||
|---|---|---|---|---|---|---|---|---|---|
| Total | TP | FP | |||||||
| Scenario 1 | Algorithm A | 4.0 | 6.4 | −2.4 | 14.7 | 8.4% | + 2 | −0.4 | 0.3 |
| Algorithm B | 13.8 | 7.6 | 6.2 | 24.2 | 12.2% | −5 | 0.8 | 0.6 | |
| Scenario 2 | ICF with microscopy | 24.3 | 1.3 | 23.0 | 3.6 | 3.6% | −11 | 17.7 | 6.7 |
| ICF with GeneXpert | −25.1 | 6.6 | − 31.7 | 5.0 | 4.3% | + 36 | −4.8 | −5.0 | |
TP True positive notification; FP False positive notification; PPV Positive predictive value; Scenario 1 comparing the impact of two different diagnostic algorithms in a defined population; Algorithm A Prolonged cough & GeneXpert; Algorithm B Any symptom & microscopy/clinical diagnosis; Scenario 2 Examining the impact of expanding case detection towards population of lower disease
Fig. 4Modelled number of cases averted, with and without considering screening amongst healthy individuals