Literature DB >> 3003098

Binding of 17O-labeled substrate and inhibitors to protocatechuate 4,5-dioxygenase-nitrosyl complex. Evidence for direct substrate binding to the active site Fe2+ of extradiol dioxygenases.

D M Arciero, J D Lipscomb.   

Abstract

Pseudomonas testosteroni protocatechuate 4,5-dioxygenase catalyzes extradiol-type oxygenolytic cleavage of the aromatic ring of its substrate. The essential active site Fe2+ binds nitric oxide (NO) to produce an EPR active complex with an electronic spin of S = 3/2. Hyperfine broadening of the EPR resonances of the nitrosyl complex of the enzyme by protocatechuate (3,4-(OH)2-benzoate, PCA) enriched specifically with 17O (I = 5/2) in either the 3 or the 4 hydroxyl group shows that both groups can bind directly to the Fe2+ in the ternary complex. Analogous results are obtained for PCA binding to catechol 2,3-dioxygenase-NO complex suggesting that substrate binding by the Fe2+ may be a general property of extradiol dioxygenases. The protocatechuate 4,5-dioxygenase inhibitor, 4-17OH-benzoate binds directly to the Fe of the nitrosyl adduct of the enzyme through the OH group. Since previous studies have shown that water also is bound to the Fe in this ternary complex, but not in the ternary complex with PCA, the data strongly imply that there are 3 sites in the Fe coordination which can be occupied by exogenous ligands. 3-17OH-benzoate is an inhibitor of the enzyme but does not elicit detectable hyperfine broadening in the EPR spectrum of the nitrosyl adduct suggesting that it binds to the enzyme, but not to the Fe. The EPR spectra of ternary enzyme-NO complexes with PCA or 4-OH-benzoate labeled with 17O exclusively in the carboxylate substituent are not broadened, suggesting that this moiety does not bind to the Fe.

Entities:  

Mesh:

Substances:

Year:  1986        PMID: 3003098

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

Review 1.  Oxygen activation by mononuclear nonheme iron dioxygenases involved in the degradation of aromatics.

Authors:  Yifan Wang; Jiasong Li; Aimin Liu
Journal:  J Biol Inorg Chem       Date:  2017-01-13       Impact factor: 3.358

Review 2.  Finding intermediates in the O2 activation pathways of non-heme iron oxygenases.

Authors:  E G Kovaleva; M B Neibergall; S Chakrabarty; J D Lipscomb
Journal:  Acc Chem Res       Date:  2007-06-14       Impact factor: 22.384

3.  Oxy intermediates of homoprotocatechuate 2,3-dioxygenase: facile electron transfer between substrates.

Authors:  Michael M Mbughuni; Mrinmoy Chakrabarti; Joshua A Hayden; Katlyn K Meier; Joseph J Dalluge; Michael P Hendrich; Eckard Münck; John D Lipscomb
Journal:  Biochemistry       Date:  2011-11-01       Impact factor: 3.162

4.  Molecular cloning of the protocatechuate 4,5-dioxygenase genes of Pseudomonas paucimobilis.

Authors:  Y Noda; S Nishikawa; K Shiozuka; H Kadokura; H Nakajima; K Yoda; Y Katayama; N Morohoshi; T Haraguchi; M Yamasaki
Journal:  J Bacteriol       Date:  1990-05       Impact factor: 3.490

Review 5.  Metallation and mismetallation of iron and manganese proteins in vitro and in vivo: the class I ribonucleotide reductases as a case study.

Authors:  Joseph A Cotruvo; Joanne Stubbe
Journal:  Metallomics       Date:  2012-09-18       Impact factor: 4.526

6.  Substrate-mediated oxygen activation by homoprotocatechuate 2,3-dioxygenase: intermediates formed by a tyrosine 257 variant.

Authors:  Michael M Mbughuni; Katlyn K Meier; Eckard Münck; John D Lipscomb
Journal:  Biochemistry       Date:  2012-10-29       Impact factor: 3.162

7.  Structural basis for the role of tyrosine 257 of homoprotocatechuate 2,3-dioxygenase in substrate and oxygen activation.

Authors:  Elena G Kovaleva; John D Lipscomb
Journal:  Biochemistry       Date:  2012-10-29       Impact factor: 3.162

8.  Intermediate in the O-O bond cleavage reaction of an extradiol dioxygenase.

Authors:  Elena G Kovaleva; John D Lipscomb
Journal:  Biochemistry       Date:  2008-10-01       Impact factor: 3.162

9.  Structural characterization of 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA) from Sphingobium chlorophenolicum, a new type of aromatic ring-cleavage enzyme.

Authors:  Robert P Hayes; Abigail R Green; Mark S Nissen; Kevin M Lewis; Luying Xun; Chulhee Kang
Journal:  Mol Microbiol       Date:  2013-03-26       Impact factor: 3.501

10.  Characterization of NO adducts of the diiron center in protein R2 of Escherichia coli ribonucleotide reductase and site-directed variants; implications for the O2 activation mechanism.

Authors:  Shen Lu; Eduardo Libby; Lana Saleh; Gang Xing; J Martin Bollinger; Pierre Moënne-Loccoz
Journal:  J Biol Inorg Chem       Date:  2004-08-11       Impact factor: 3.358

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.