Literature DB >> 30030631

Computational molecular species delimitation and taxonomic revision of the gecko genus Ebenavia Boettger, 1878.

Oliver Hawlitschek1, Mark D Scherz2,3, Bernhard Ruthensteiner2, Angelica Crottini4, Frank Glaw2.   

Abstract

Cryptic species have been detected in many groups of organisms and must be assumed to make up a significant portion of global biodiversity. We study geckos of the Ebenavia inunguis complex from Madagascar and surrounding islands and use species delimitation algorithms (GMYC, BOLD, BPP), COI barcode divergence, diagnostic codon indels in the nuclear marker PRLR, diagnostic categorical morphological characters, and significant differences in continuous morphological characters for its taxonomic revision. BPP yielded ≥ 10 operational taxonomic units, whereas GMYC (≥ 27) and BOLD (26) suggested substantial oversplitting. In consequnce, we resurrect Ebenavia boettgeri Boulenger 1885 and describe Ebenavia tuelinae sp. nov., Ebenavia safari sp. nov., and Ebenavia robusta sp. nov., increasing the number of recognised species in Ebenavia from two to six. Further lineages of Ebenavia retrieved by BPP may warrant species or subspecies status, but further taxonomic conclusions are postponed until more data become available. Finally, we present an identification key to the genus Ebenavia, provide an updated distribution map, and discuss the diagnostic values of computational species delimitation as well as morphological and molecular diagnostic characters.

Entities:  

Keywords:  BOLD; Integrative taxonomy; Madagascar clawless gecko; Operational Taxonomic Unit; Species complex; Taxonomic inflation

Mesh:

Year:  2018        PMID: 30030631     DOI: 10.1007/s00114-018-1574-9

Source DB:  PubMed          Journal:  Naturwissenschaften        ISSN: 0028-1042


  34 in total

1.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

2.  Effects of vicariant barriers, habitat stability, population isolation and environmental features on species divergence in the south-western Australian coastal reptile community.

Authors:  D L Edwards; J S Keogh; L L Knowles
Journal:  Mol Ecol       Date:  2012-05-30       Impact factor: 6.185

3.  Identification of the reptilian prolactin and its receptor cDNAs in the leopard gecko, Eublepharis macularius.

Authors:  Keisuke Kato; Tadahiro Ikemoto; Min Kyun Park
Journal:  Gene       Date:  2005-02-14       Impact factor: 3.688

4.  Reservoirs of richness: least disturbed tropical forests are centres of undescribed species diversity.

Authors:  Xingli Giam; Brett R Scheffers; Navjot S Sodhi; David S Wilcove; Gerardo Ceballos; Paul R Ehrlich
Journal:  Proc Biol Sci       Date:  2011-05-18       Impact factor: 5.349

5.  A Return to Linnaeus's Focus on Diagnosis, Not Description: The Use of DNA Characters in the Formal Naming of Species.

Authors:  Susanne S Renner
Journal:  Syst Biol       Date:  2016-05-04       Impact factor: 15.683

Review 6.  Cryptic species as a window on diversity and conservation.

Authors:  David Bickford; David J Lohman; Navjot S Sodhi; Peter K L Ng; Rudolf Meier; Kevin Winker; Krista K Ingram; Indraneil Das
Journal:  Trends Ecol Evol       Date:  2006-11-28       Impact factor: 17.712

7.  Geographical patterns of deep mitochondrial differentiation in widespread Malagasy reptiles.

Authors:  Louis Boumans; David R Vieites; Frank Glaw; Miguel Vences
Journal:  Mol Phylogenet Evol       Date:  2007-07-10       Impact factor: 4.286

8.  Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator.

Authors:  Paul D N Hebert; Erin H Penton; John M Burns; Daniel H Janzen; Winnie Hallwachs
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-01       Impact factor: 11.205

9.  A new species of the Boophis rappiodes group (Anura, Mantellidae) from the Sahamalaza Peninsula, northwest Madagascar, with acoustic monitoring of its nocturnal calling activity.

Authors:  Samuel G Penny; Franco Andreone; Angelica Crottini; Marc W Holderied; Lovasoa Sylviane Rakotozafy; Christoph Schwitzer; Gonçalo M Rosa
Journal:  Zookeys       Date:  2014-08-18       Impact factor: 1.546

10.  Alike but different: the evolution of the Tubifex tubifex species complex (Annelida, Clitellata) through polyploidization.

Authors:  Roberto Marotta; Angelica Crottini; Elena Raimondi; Cristina Fondello; Marco Ferraguti
Journal:  BMC Evol Biol       Date:  2014-04-02       Impact factor: 3.260

View more
  1 in total

1.  Integrating phylogeography and high-resolution X-ray CT reveals five new cryptic species and multiple hybrid zones among Australian earless dragons.

Authors:  Jane Melville; Kirilee Chaplin; Christy A Hipsley; Stephen D Sarre; Joanna Sumner; Mark Hutchinson
Journal:  R Soc Open Sci       Date:  2019-12-18       Impact factor: 2.963

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.