Literature DB >> 30028003

Distal renal tubular acidosis caused by tryptophan-aspartate repeat domain 72 (WDR72) mutations.

N Rungroj1,2, C Nettuwakul1, N Sawasdee1, S Sangnual1, N Deejai1, R A Misgar3, A Pasena1,4, S Khositseth5, S Kirdpon6, S Sritippayawan7, S Vasuvattakul7, P T Yenchitsomanus1.   

Abstract

Hereditary distal renal tubular acidosis (dRTA) is a rare genetic disease that is caused by mutations in SLC4A1, ATP6V1B1, or ATP6V0A4. However, there are many families with hereditary dRTA in whom the disease-causing genes are unknown. Accordingly, we performed whole exome sequencing and genetic studies of the members of a family with autosomal recessive dRTA of an unknown genetic etiology. Here, we report compound heterozygous pathogenic variations in tryptophan-aspartate repeat domain 72 (WDR72) (c.1777A>G [p.R593G] and c.2522T>A [p.L841Q]) in three affected siblings of a family with dRTA. Both variants segregated with dRTA in the family and were not observed in normal control subjects. Homologous modeling and in silico mutagenesis indicated that R593G and L841Q alter the H-bond formations in the nearby residues, affecting the WDR72 protein structure. All these evidences indicate that the identified WDR72 variations were probably to have caused hereditary dRTA in the reported family. In addition, homozygous nonsense mutation (c.2686C>T [p.R896X]) was identified in another family, strongly supporting the causal role of WDR72 in dRTA. Based on our literature review, WDR72 mutations associated with dRTA have not been previously described. This is the first identification of pathogenic variations in WDR72 as a cause of hereditary dRTA.
© 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  WDR72; dRTA; distal renal tubular acidosis; tryptophan-aspartate repeat domain 72; vesicle trafficking defect; whole exome sequencing

Mesh:

Substances:

Year:  2018        PMID: 30028003     DOI: 10.1111/cge.13418

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  17 in total

1.  WDR72 Mutations Associated with Amelogenesis Imperfecta and Acidosis.

Authors:  H Zhang; M Koruyucu; F Seymen; Y Kasimoglu; J-W Kim; S Tinawi; C Zhang; M L Jacquemont; A R Vieira; J P Simmer; J C C Hu
Journal:  J Dent Res       Date:  2019-02-19       Impact factor: 6.116

Review 2.  Long-term complications of primary distal renal tubular acidosis.

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Journal:  Pediatr Nephrol       Date:  2022-05-11       Impact factor: 3.714

3.  Meta-GWAS Reveals Novel Genetic Variants Associated with Urinary Excretion of Uromodulin.

Authors:  Christina B Joseph; Marta Mariniello; Ayumi Yoshifuji; Guglielmo Schiano; Jennifer Lake; Jonathan Marten; Anne Richmond; Jennifer E Huffman; Archie Campbell; Sarah E Harris; Stephan Troyanov; Massimiliano Cocca; Antonietta Robino; Sébastien Thériault; Kai-Uwe Eckardt; Matthias Wuttke; Yurong Cheng; Tanguy Corre; Ivana Kolcic; Corrinda Black; Vanessa Bruat; Maria Pina Concas; Cinzia Sala; Stefanie Aeschbacher; Franz Schaefer; Sven Bergmann; Harry Campbell; Matthias Olden; Ozren Polasek; David J Porteous; Ian J Deary; Francois Madore; Philip Awadalla; Giorgia Girotto; Sheila Ulivi; David Conen; Elke Wuehl; Eric Olinger; James F Wilson; Murielle Bochud; Anna Köttgen; Caroline Hayward; Olivier Devuyst
Journal:  J Am Soc Nephrol       Date:  2022-03       Impact factor: 10.121

Review 4.  The genetics of kidney stone disease and nephrocalcinosis.

Authors:  Prince Singh; Peter C Harris; David J Sas; John C Lieske
Journal:  Nat Rev Nephrol       Date:  2021-12-14       Impact factor: 28.314

5.  Whole-exome sequencing and variant spectrum in children with suspected inherited renal tubular disorder: the East India Tubulopathy Gene Study.

Authors:  Rajiv Sinha; Subal Pradhan; Sushmita Banerjee; Afsana Jahan; Shakil Akhtar; Amitava Pahari; Sumantra Raut; Prince Parakh; Surupa Basu; Priyanka Srivastava; Snehamayee Nayak; S G Thenral; V Ramprasad; Emma Ashton; Detlef Bockenhauer; Kausik Mandal
Journal:  Pediatr Nephrol       Date:  2022-01-10       Impact factor: 3.651

6.  Molecular aspects and long-term outcome of patients with primary distal renal tubular acidosis.

Authors:  Sara Gómez-Conde; Alejandro García-Castaño; Mireia Aguirre; María Herrero; Leire Gondra; Nélida García-Pérez; Paula García-Ledesma; Luis Martín-Penagos; Cecilia Dall'Anese; Gema Ariceta; Luis Castaño; Leire Madariaga
Journal:  Pediatr Nephrol       Date:  2021-04-21       Impact factor: 3.714

7.  Mutations in RELT cause autosomal recessive amelogenesis imperfecta.

Authors:  Jung-Wook Kim; Hong Zhang; Figen Seymen; Mine Koruyucu; Yuanyuan Hu; Jenny Kang; Youn J Kim; Atsushi Ikeda; Yelda Kasimoglu; Merve Bayram; Chuhua Zhang; Kazuhiko Kawasaki; John D Bartlett; Thomas L Saunders; James P Simmer; Jan C-C Hu
Journal:  Clin Genet       Date:  2018-12-21       Impact factor: 4.438

Review 8.  Inherited Tubulopathies of the Kidney: Insights from Genetics.

Authors:  Mallory L Downie; Sergio C Lopez Garcia; Robert Kleta; Detlef Bockenhauer
Journal:  Clin J Am Soc Nephrol       Date:  2020-04-01       Impact factor: 8.237

9.  Whole exome sequencing identified ATP6V1C2 as a novel candidate gene for recessive distal renal tubular acidosis.

Authors:  Tilman Jobst-Schwan; Verena Klämbt; Maureen Tarsio; John F Heneghan; Amar J Majmundar; Shirlee Shril; Florian Buerger; Isabel Ottlewski; Boris E Shmukler; Rezan Topaloglu; Seema Hashmi; Farkhanda Hafeez; Francesco Emma; Marcella Greco; Guido F Laube; Hanan M Fathy; Martin Pohl; Jutta Gellermann; Danko Milosevic; Michelle A Baum; Shrikant Mane; Richard P Lifton; Patricia M Kane; Seth L Alper; Friedhelm Hildebrandt
Journal:  Kidney Int       Date:  2019-10-22       Impact factor: 10.612

Review 10.  Genetics of kidney stone disease.

Authors:  Sarah A Howles; Rajesh V Thakker
Journal:  Nat Rev Urol       Date:  2020-06-12       Impact factor: 14.432

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