Literature DB >> 30025170

A closer look at Verogen's Forenseq™ DNA Signature Prep kit autosomal and Y-STR data for streamlined analysis of routine reference samples.

Lilliana I Moreno1, Michelle B Galusha1, Rebecca Just1.   

Abstract

Massively parallel sequencing (MPS) provides forensic DNA laboratories an option to overcome the limitations associated with CE and current STR assays. Verogen's MPS ForenseqTM DNA Signature kit concomitantly amplifies 27 autosomal, 7 X-, and 24 Y-STRs. In addition, 94 identity, 56 ancestry, and 22 phenotypic-informative SNPs are included for a total of over 200 markers in one multiplex. An internal validation of this platform was conducted using reference samples to investigate whether the Forenseq™ DNA Signature Prep kit, specifically primer panel B, has the capability to provide consistent and accurate typing/sequencing data. The data presented in this report is limited to that corresponding to autosomal and Y-STRs. Results suggest that the system can consistently generate accurate genotyping data when up to 40 high-quality, high-quantity (i.e. 1 ng) single source samples are pooled into a sequencing reaction. The results generated were used to determine appropriate analysis parameters and thresholds for streamlined data interpretation of reference samples. © Published 2018 This article is a U.S. Government work and is in the public domain in the USA.

Entities:  

Keywords:  Forenseq™ DNA Signature Prep Kit; Massively parallel sequencing; Next generation sequencing; Reference samples; Y-STR

Mesh:

Year:  2018        PMID: 30025170     DOI: 10.1002/elps.201800087

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  4 in total

1.  The forensic landscape and the population genetic analyses of Hainan Li based on massively parallel sequencing DNA profiling.

Authors:  Haoliang Fan; Zhengming Du; Fenfen Wang; Xiao Wang; Shao-Qing Wen; Lingxiang Wang; Panxin Du; Hai Liu; Shengping Cao; Zhenming Luo; Bingbing Han; Peiyu Huang; Bofeng Zhu; Pingming Qiu
Journal:  Int J Legal Med       Date:  2021-04-13       Impact factor: 2.686

Review 2.  Interpol review of forensic biology and forensic DNA typing 2016-2019.

Authors:  John M Butler; Sheila Willis
Journal:  Forensic Sci Int       Date:  2020-02-20       Impact factor: 2.395

3.  Validation and beyond: Next generation sequencing of forensic casework samples including challenging tissue samples from altered human corpses using the MiSeq FGx system.

Authors:  Alina Senst; Amke Caliebe; Eva Scheurer; Iris Schulz
Journal:  J Forensic Sci       Date:  2022-03-22       Impact factor: 1.717

4.  Inter-laboratory study on standardized MPS libraries: evaluation of performance, concordance, and sensitivity using mixtures and degraded DNA.

Authors:  Petra Müller; Christian Sell; Thorsten Hadrys; Johannes Hedman; Steffi Bredemeyer; Francois-Xavier Laurent; Lutz Roewer; Sabrina Achtruth; Maja Sidstedt; Titia Sijen; Marc Trimborn; Natalie Weiler; Sascha Willuweit; Ingo Bastisch; Walther Parson
Journal:  Int J Legal Med       Date:  2019-11-19       Impact factor: 2.686

  4 in total

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