| Literature DB >> 30023755 |
Joshua Odingo1, Mai A Bailey1, Megan Files1, Julie V Early1, Torey Alling1, Devon Dennison1, Julie Bowman1, Suryakanta Dalai2, Naresh Kumar2, Jeffrey Cramer3, Thierry Masquelin3, Philip A Hipskind3, Tanya Parish1.
Abstract
Nitazoxanide has antiparasitic and antibiotic activities including activity against Mycobacterium tuberculosis. We prepared and evaluated a set of its analogues to determine the structure-activity relationship, and identified several amide- and urea-based analogues with low micromolar activity against M. tuberculosis in vitro. Pharmacokinetics in the rat suggested a path forward to obtain bioavailable compounds. The series had a good microbiological profile with bactericidal activity in vitro against replicating and nonreplicating M. tuberculosis. Analogues had limited activity against other Gram-positive bacteria but no activity against Gram-negative bacteria. Our studies identified the key liability in this series as cytotoxicity. Future work concentrating on identifying the target(s) could assist in removing activity against eukaryotic cells.Entities:
Year: 2017 PMID: 30023755 PMCID: PMC6044914 DOI: 10.1021/acsomega.7b00892
Source DB: PubMed Journal: ACS Omega ISSN: 2470-1343
Figure 1General synthesis of analogues. Reagents and conditions: (a) RCOCl, Et3N, THF or RCO2H, T3P, Et3N, MeCN, rt, 16 h; (b) RNCO, Et3N, THF; (c) RSO2Cl, Et3N, DCM, rt,16 h; (d) RCHO, Et3SiH, trifluoroacetyl (TFA), MeCN, 80°C, 4 h.
SAR Studies of the Salicylate Region of 1
| compound | R1 | R2 | MIC (μM) | TC50 (μM) |
|---|---|---|---|---|
| 0.0040 | >50 | |||
| AcO– | H | 14 ± 0 | >20 | |
| HO– | H | 20 ± 0 | >20 | |
| OGlucoron | H | >20 | >50 | |
| H– | H | >20 | 19 | |
| H2N– | H | >20 | 31 | |
| MeHN– | H | >20 | 15 | |
| AcHN– | H | >20 | ND | |
| Et(Me)2CCO2– | H | 1.4 ± 0.070 | 6.2 | |
| Et(Me)2CCOHN– | H | 17 ± 4.9 | 4.1 | |
| H | 17 ± 4.2 | 6.6 | ||
| HO– | 5-F | >20 | ND | |
| HO– | 5-Me | >20 | 12 | |
| HO– | 3-Me | >20 | 12 | |
| Et(Me)2CCO2– | 4-( | >20 | 12 | |
| HO– | 5-OH | >20 | 13 | |
| HO2C– | H | >20 | >50 | |
| MeO– | H | >20 | ND | |
| 3-(Et(Me)2CCOHN−) | N/A | 1.4 ± 0.60 | 0.9 | |
| H | N/A | 2.4 ± 0.0071 | 20 | |
| 4-OMe | N/A | 5.6 ± 4.2 | 11 | |
| 5-OMe– | N/A | 5.5 ± 2.1 | 4.3 | |
| 3-iPrO– | N/A | 16 ± 6.4 | 8.9 | |
| 3-(Et(Me)2CCO2−) | N/A | 12 ± 1.0 | 21 | |
| 3-OMe | N/A | >20 | 37 | |
| 5-( | N/A | >20 | 11 |
Compounds were tested for activity against M. tuberculosis. MIC is the minimum concentration required to inhibit the growth of M. tuberculosis in liquid culture. MICs of active compounds are the average ± standard deviation of two independent experiments.
Toxic concentration (TC50) is the concentration required to inhibit growth of Vero cells by 50%. ND = not determined. Note that compounds 1 and 2 were tested at a maximum concentration of 20 μM, all other compounds were tested at a maximum concentration of 50 μM.
SAR Studies of the Salicylate Region of 1
| compound | R1 | MIC (μM) | TC50 (μM) |
|---|---|---|---|
| methyl | >20 | >50 | |
| cyclopropyl | >20 | >50 | |
| cyclohexyl | >20 | >50 | |
| 2-(OH)cyclohexyl | >20 | 37 | |
| 4-pyrimidinyl | >20 | >50 | |
| 1-piperidinyl | >20 | >50 | |
| 2-pyrazinyl | >20 | >50 | |
| 2-thiazolyl | >20 | >50 | |
| 3-pyridyl | >20 | >50 | |
| 4-pyridyl | >20 | >50 | |
| 1-naphthylNH– | 17 ± 3.0 | >50 | |
| PhNH– | 17 ± 4.2 | 7.0 | |
| cyclohexylNH– | >20 | 6.1 | |
| 2-pyridylNH– | >20 | 17 | |
| 2-(1-methylimidazolyl) | >20 | >50 | |
| 2-oxazolyl | >20 | >50 | |
| 3-isoxazolyl | >20 | >50 | |
| 2-(5-methylthiazolyl) | >20 | 18 | |
| benzothiazolyl | >20 | 32 |
Compounds were tested for activity against M. tuberculosis. MIC (in μM) is the minimum concentration required to inhibit the growth of M. tuberculosis in liquid culture. MICs of active compounds are the average ± standard deviation of two independent experiments.
Toxic concentration (TC50, in μM) is the concentration required to inhibit growth of Vero cells by 50%.
SAR Studies of the Thiazole Region of 1
| compound | R1 | R2 | R3 | MIC (μM) | TC50 (μM) |
|---|---|---|---|---|---|
| H | H | OAc | >20 | >50 | |
| NO2 | Me | OH | >20 | 5.2 | |
| COOMe | H | OH | >20 | >50 | |
| Me | H | N/A | >20 | 12 | |
| CF3 | H | N/A | 5.3 ± 0.20 | 0.8 | |
| NO2 | Me | N/A | 1.5 ± 0.60 | 4.2 | |
| COOH | H | N/A | >20 | >50 | |
| H | 2-pyridyl | N/A | >20 | 15 | |
| NO2 | 2-pyridyl | N/A | 8.5 ± 2.1 | 6.4 |
Compounds were tested for activity against M. tuberculosis. MIC (in μM) is the minimum concentration required to inhibit the growth of M. tuberculosis in liquid culture. MICs of active compounds are the average ± standard deviation of two independent experiments except where asterisked (N = 1).
Toxic concentration (TC50, in μM) is the concentration required to inhibit growth of Vero cells by 50%.
SAR Studies of the Linker Region of 1
Compounds were tested for activity against M. tuberculosis. MIC (in μM) is the minimum concentration required to inhibit the growth of M. tuberculosis in liquid culture. MICs of active compounds are the average of two independent experiments.
Toxic concentration (TC50, in μM) is the concentration required to inhibit growth of Vero cells by 50%. ND = not determined.
PK Parameters for Selected Analogues in the Rata
| compound | Cl (mL/(min kg)) | PO AUC (ng h/mL) | bioavailability
(% | ||||
|---|---|---|---|---|---|---|---|
| 265.25 | 2.42 | 113.5 | 0.698 ± 0.327 | 57.5 ± 3.3 | 167 ± 10 | 5.8 ± 0.1 | |
| 249.25 | 1.8 | 93.27 | 0.18 ± 0.006 | 6.1 ± 0.5 | 17 500 ± 2820 | 63.5 ± 6.9 | |
| 279.28 | 2.87 | 113.5 | 0.160 ± 0.012 | 8.96 ± 0.51 | 13 600 ± 3890 | 72.5 ± 18.4 | |
| 255.3 | 2.34 | 93.27 | 0.68 ± 0.12 | 69.8 ± 4.3 | 418 ± 96 | 17.5 ± 4.2 |
Clearance (Cl), volume of distribution (Vd,ss), area-under-the-curve (PO AUC), and bioavailability (%F) are the mean ± standard deviation of three animals. Studies were conducted in accordance with ethical guidelines.
Spectrum of Antibacterial Activitya
| MIC
(μM) | ||||||
|---|---|---|---|---|---|---|
| compound | ||||||
| >25 | >25 | >100 | 1.0 | >50 | >100 | |
| >100 | 100 | >100 | 3.1 | >100 | 12.5 | |
| >100 | >100 | >100 | 50 | 50 | >100 | |
MIC99’s were determined by the serial dilution method on a solid medium.
Figure 2Analogues of 1 have bactericidal activity under aerobic conditions.
Figure 3Analogues of 1 have bactericidal activity under nonreplicating conditions.